RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
PDE4D-203ENST00000340635 PELP1Q8IZL8 1130 aaKnown RBP22.88■■□□□ 1.25
PDE4D-203ENST00000340635 ERICH6Q7L0X2 663 aa22.05■■□□□ 1.12
PDE4D-203ENST00000340635 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.09
PDE4D-203ENST00000340635 EHMT2Q96KQ7 1210 aa21.72■■□□□ 1.07
PDE4D-203ENST00000340635 SUPT5HO00267 1087 aaKnown RBP21.7■■□□□ 1.06
PDE4D-203ENST00000340635 APLP2Q06481 763 aa21.64■■□□□ 1.05
PDE4D-203ENST00000340635 MYT1Q01538 1121 aa21.53■■□□□ 1.04
PDE4D-203ENST00000340635 FAM9AQ8IZU1 332 aaPredicted RBP21.51■■□□□ 1.03
PDE4D-203ENST00000340635 CENPBP07199 599 aaPredicted RBP21.26■□□□□ 0.99
PDE4D-203ENST00000340635 NEFLP07196 543 aa21.1■□□□□ 0.97
PDE4D-203ENST00000340635 TTBK1Q5TCY1 1321 aaPredicted RBP21.07■□□□□ 0.96
PDE4D-203ENST00000340635 DAXXQ9UER7 740 aaPredicted RBP20.97■□□□□ 0.95
PDE4D-203ENST00000340635 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
PDE4D-203ENST00000340635 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
PDE4D-203ENST00000340635 YTHDC1Q96MU7 727 aaKnown RBP20.88■□□□□ 0.93
PDE4D-203ENST00000340635 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
PDE4D-203ENST00000340635 ZEB1P37275 1124 aaPredicted RBP20.74■□□□□ 0.91
PDE4D-203ENST00000340635 RANGAP1P46060 587 aaPredicted RBP20.71■□□□□ 0.91
PDE4D-203ENST00000340635 ZNF316A6NFI3 1004 aaPredicted RBP20.38■□□□□ 0.85
PDE4D-203ENST00000340635 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
PDE4D-203ENST00000340635 POLR3GLQ9BT43 218 aa20.29■□□□□ 0.84
PDE4D-203ENST00000340635 MYT1LQ9UL68 1186 aa20.27■□□□□ 0.84
PDE4D-203ENST00000340635 CLSPNQ9HAW4 1339 aa20.22■□□□□ 0.83
PDE4D-203ENST00000340635 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
PDE4D-203ENST00000340635 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
PDE4D-203ENST00000340635 CNGB1Q14028 1251 aaPredicted RBP20.05■□□□□ 0.8
PDE4D-203ENST00000340635 TRIM41Q8WV44 630 aa20.03■□□□□ 0.8
PDE4D-203ENST00000340635 CHIC1Q5VXU3 224 aa20.02■□□□□ 0.8
PDE4D-203ENST00000340635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.87■□□□□ 0.77
PDE4D-203ENST00000340635 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
PDE4D-203ENST00000340635 ZBTB47Q9UFB7 747 aaPredicted RBP19.84■□□□□ 0.77
PDE4D-203ENST00000340635 NISCHQ9Y2I1 1504 aa19.83■□□□□ 0.77
PDE4D-203ENST00000340635 ITGAEP38570 1179 aa19.8■□□□□ 0.76
PDE4D-203ENST00000340635 PPARGC1BQ86YN6 1023 aaKnown RBP19.76■□□□□ 0.75
PDE4D-203ENST00000340635 SLC24A1O60721 1099 aa19.64■□□□□ 0.73
PDE4D-203ENST00000340635 BCL11AQ9H165 835 aa19.6■□□□□ 0.73
PDE4D-203ENST00000340635 HRCP23327 699 aa19.57■□□□□ 0.72
PDE4D-203ENST00000340635 TRIM26Q12899 539 aaPredicted RBP19.56■□□□□ 0.72
PDE4D-203ENST00000340635 CANXP27824 592 aaKnown RBP19.47■□□□□ 0.71
PDE4D-203ENST00000340635 ANP32BQ92688 251 aaKnown RBP19.47■□□□□ 0.71
PDE4D-203ENST00000340635 CDK11AQ9UQ88 783 aaPredicted RBP19.45■□□□□ 0.7
PDE4D-203ENST00000340635 EIF5BO60841 1220 aaKnown RBP19.42■□□□□ 0.7
PDE4D-203ENST00000340635 GLIPR1L2Q4G1C9 344 aa19.38■□□□□ 0.69
PDE4D-203ENST00000340635 BCANQ96GW7 911 aa19.35■□□□□ 0.69
PDE4D-203ENST00000340635 NEFMP07197 916 aa19.34■□□□□ 0.69
PDE4D-203ENST00000340635 ANP32AP39687 249 aaKnown RBP19.26■□□□□ 0.67
PDE4D-203ENST00000340635 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
PDE4D-203ENST00000340635 HSP90AA1P07900 732 aaKnown RBP19.24■□□□□ 0.67
PDE4D-203ENST00000340635 CDK11BP21127 795 aaKnown RBP19.22■□□□□ 0.67
PDE4D-203ENST00000340635 TRIM52Q96A61 297 aa19.21■□□□□ 0.67
PDE4D-203ENST00000340635 ANP32CO43423 234 aa19.15■□□□□ 0.66
PDE4D-203ENST00000340635 ZNF326Q5BKZ1 582 aaKnown RBP19.14■□□□□ 0.65
PDE4D-203ENST00000340635 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.65
PDE4D-203ENST00000340635 NPM2Q86SE8 214 aaKnown RBP19.13■□□□□ 0.65
PDE4D-203ENST00000340635 NEUROD1Q13562 356 aa19.09■□□□□ 0.65
PDE4D-203ENST00000340635 GTF3C3Q9Y5Q9 886 aa19.05■□□□□ 0.64
PDE4D-203ENST00000340635 UPF2Q9HAU5 1272 aaKnown RBP19.03■□□□□ 0.64
PDE4D-203ENST00000340635 ARXQ96QS3 562 aa18.88■□□□□ 0.61
PDE4D-203ENST00000340635 TNNT2P45379 298 aaPredicted RBP18.78■□□□□ 0.6
PDE4D-203ENST00000340635 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
PDE4D-203ENST00000340635 NBR1Q14596 966 aa18.71■□□□□ 0.59
PDE4D-203ENST00000340635 ESF1Q9H501 851 aaKnown RBP18.7■□□□□ 0.58
PDE4D-203ENST00000340635 TULP1O00294 542 aaPredicted RBP18.65■□□□□ 0.58
PDE4D-203ENST00000340635 TRIM44Q96DX7 344 aaPredicted RBP18.63■□□□□ 0.57
PDE4D-203ENST00000340635 ACIN1Q9UKV3 1341 aaKnown RBP18.62■□□□□ 0.57
PDE4D-203ENST00000340635 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.62■□□□□ 0.57
PDE4D-203ENST00000340635 A0A0G2JS52 829 aa18.62■□□□□ 0.57
PDE4D-203ENST00000340635 NCLP19338 710 aaKnown RBP18.62■□□□□ 0.57
PDE4D-203ENST00000340635 STAG3Q9UJ98 1225 aa18.62■□□□□ 0.57
PDE4D-203ENST00000340635 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.57
PDE4D-203ENST00000340635 ZRSR1Q15695 479 aaKnown RBP18.58■□□□□ 0.57
PDE4D-203ENST00000340635 MYH16Q9H6N6 1097 aa18.57■□□□□ 0.56
PDE4D-203ENST00000340635 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
PDE4D-203ENST00000340635 FBLN2P98095 1184 aa18.56■□□□□ 0.56
PDE4D-203ENST00000340635 FKBP8Q14318 412 aa18.54■□□□□ 0.56
PDE4D-203ENST00000340635 DNTTIP2Q5QJE6 756 aaKnown RBP18.51■□□□□ 0.55
PDE4D-203ENST00000340635 PTMAP06454 111 aaKnown RBP18.49■□□□□ 0.55
PDE4D-203ENST00000340635 CHGAP10645 457 aaKnown RBP18.48■□□□□ 0.55
PDE4D-203ENST00000340635 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
PDE4D-203ENST00000340635 SALL2Q9Y467 1007 aaPredicted RBP18.47■□□□□ 0.55
PDE4D-203ENST00000340635 GOLGA6L22H0YM25 854 aa18.46■□□□□ 0.55
PDE4D-203ENST00000340635 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
PDE4D-203ENST00000340635 ANP32EQ9BTT0 268 aa18.43■□□□□ 0.54
PDE4D-203ENST00000340635 BECN1Q14457 450 aa18.42■□□□□ 0.54
PDE4D-203ENST00000340635 HNRNPUQ00839 825 aaKnown RBP eCLIP18.41■□□□□ 0.54
PDE4D-203ENST00000340635 ZNF777Q9ULD5 760 aaPredicted RBP18.41■□□□□ 0.54
PDE4D-203ENST00000340635 FAM9BQ8IZU0 186 aa18.4■□□□□ 0.54
PDE4D-203ENST00000340635 WDR43Q15061 677 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDE4D-203ENST00000340635 TPRNQ4KMQ1 711 aa18.36■□□□□ 0.53
PDE4D-203ENST00000340635 ARID3CA6NKF2 412 aa18.35■□□□□ 0.53
PDE4D-203ENST00000340635 GOLGA6L6A8MZA4 724 aa18.34■□□□□ 0.53
PDE4D-203ENST00000340635 DDRGK1Q96HY6 314 aa18.32■□□□□ 0.52
PDE4D-203ENST00000340635 TMC1Q8TDI8 760 aa18.32■□□□□ 0.52
PDE4D-203ENST00000340635 ZBTB7CA1YPR0 619 aa18.31■□□□□ 0.52
PDE4D-203ENST00000340635 CASC1Q6TDU7 716 aa18.29■□□□□ 0.52
PDE4D-203ENST00000340635 NAP1L5Q96NT1 182 aaPredicted RBP18.28■□□□□ 0.52
PDE4D-203ENST00000340635 CLSTN1O94985 981 aa18.27■□□□□ 0.51
PDE4D-203ENST00000340635 AMER1Q5JTC6 1135 aaPredicted RBP18.26■□□□□ 0.51
PDE4D-203ENST00000340635 TONSLQ96HA7 1378 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms