RNA–Protein interactions for RNA: ENST00000471979.6

PACRGL-205, Transcript of parkin coregulated like, humanhuman

TSL 2

Gene PACRGL, Length 1,394 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-205ENST00000471979 AEBP2Q6ZN18 517 aaPredicted RBP23.46■■□□□ 1.35
PACRGL-205ENST00000471979 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
PACRGL-205ENST00000471979 PHF23Q9BUL5 403 aaPredicted RBP20.68■□□□□ 0.9
PACRGL-205ENST00000471979 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
PACRGL-205ENST00000471979 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
PACRGL-205ENST00000471979 FOXD1Q16676 465 aa18.29■□□□□ 0.52
PACRGL-205ENST00000471979 PPP6R1Q9UPN7 881 aa18.08■□□□□ 0.49
PACRGL-205ENST00000471979 ADRA2BP18089 450 aa18.07■□□□□ 0.48
PACRGL-205ENST00000471979 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
PACRGL-205ENST00000471979 KCNA4P22459 653 aa17.28■□□□□ 0.36
PACRGL-205ENST00000471979 PPP4R3CPQ6ZMV5 832 aa17■□□□□ 0.31
PACRGL-205ENST00000471979 EHMT2Q96KQ7 1210 aa16.71■□□□□ 0.27
PACRGL-205ENST00000471979 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
PACRGL-205ENST00000471979 MSH5O43196 834 aa16.55■□□□□ 0.24
PACRGL-205ENST00000471979 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
PACRGL-205ENST00000471979 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
PACRGL-205ENST00000471979 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
PACRGL-205ENST00000471979 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
PACRGL-205ENST00000471979 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
PACRGL-205ENST00000471979 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
PACRGL-205ENST00000471979 MAPK8IP2Q13387 824 aaPredicted RBP16.25■□□□□ 0.19
PACRGL-205ENST00000471979 ZBTB22O15209 634 aa15.97■□□□□ 0.15
PACRGL-205ENST00000471979 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
PACRGL-205ENST00000471979 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
PACRGL-205ENST00000471979 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
PACRGL-205ENST00000471979 HOXD11P31277 338 aaPredicted RBP15.73■□□□□ 0.11
PACRGL-205ENST00000471979 FOXD4L1Q9NU39 408 aa15.68■□□□□ 0.1
PACRGL-205ENST00000471979 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
PACRGL-205ENST00000471979 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
PACRGL-205ENST00000471979 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
PACRGL-205ENST00000471979 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
PACRGL-205ENST00000471979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.02
PACRGL-205ENST00000471979 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
PACRGL-205ENST00000471979 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
PACRGL-205ENST00000471979 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
PACRGL-205ENST00000471979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
PACRGL-205ENST00000471979 HNRNPUL2Q1KMD3 747 aaKnown RBP14.7□□□□□ -0.06
PACRGL-205ENST00000471979 FKBP8Q14318 412 aa14.64□□□□□ -0.07
PACRGL-205ENST00000471979 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
PACRGL-205ENST00000471979 APLP2Q06481 763 aa14.38□□□□□ -0.11
PACRGL-205ENST00000471979 RTN4Q9NQC3 1192 aaKnown RBP14.34□□□□□ -0.11
PACRGL-205ENST00000471979 RNF39Q9H2S5 420 aa14.3□□□□□ -0.12
PACRGL-205ENST00000471979 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
PACRGL-205ENST00000471979 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
PACRGL-205ENST00000471979 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
PACRGL-205ENST00000471979 MKRN4PQ13434 485 aaPredicted RBP14.21□□□□□ -0.14
PACRGL-205ENST00000471979 CAPN15O75808 1086 aa14.13□□□□□ -0.15
PACRGL-205ENST00000471979 CACNB1Q02641 598 aaPredicted RBP14.12□□□□□ -0.15
PACRGL-205ENST00000471979 POLA2Q14181 598 aa14.11□□□□□ -0.15
PACRGL-205ENST00000471979 C1QBPQ07021 282 aaKnown RBP14.09□□□□□ -0.15
PACRGL-205ENST00000471979 SPDYE4A6NLX3 237 aa14.09□□□□□ -0.15
PACRGL-205ENST00000471979 FBLN2P98095 1184 aa14.03□□□□□ -0.16
PACRGL-205ENST00000471979 ABCB7O75027 752 aa13.97□□□□□ -0.17
PACRGL-205ENST00000471979 PROM2Q8N271 834 aa13.96□□□□□ -0.18
PACRGL-205ENST00000471979 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
PACRGL-205ENST00000471979 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
PACRGL-205ENST00000471979 DSG3P32926 999 aa13.81□□□□□ -0.2
PACRGL-205ENST00000471979 SLC24A1O60721 1099 aa13.78□□□□□ -0.2
PACRGL-205ENST00000471979 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
PACRGL-205ENST00000471979 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
PACRGL-205ENST00000471979 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
PACRGL-205ENST00000471979 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
PACRGL-205ENST00000471979 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
PACRGL-205ENST00000471979 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
PACRGL-205ENST00000471979 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
PACRGL-205ENST00000471979 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
PACRGL-205ENST00000471979 PABPN1Q86U42 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
PACRGL-205ENST00000471979 PKD2Q13563 968 aa13.41□□□□□ -0.26
PACRGL-205ENST00000471979 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
PACRGL-205ENST00000471979 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
PACRGL-205ENST00000471979 SPOCK2Q92563 424 aa13.32□□□□□ -0.28
PACRGL-205ENST00000471979 PLCD3Q8N3E9 789 aa13.31□□□□□ -0.28
PACRGL-205ENST00000471979 MIER1Q8N108 512 aa13.27□□□□□ -0.29
PACRGL-205ENST00000471979 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
PACRGL-205ENST00000471979 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
PACRGL-205ENST00000471979 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
PACRGL-205ENST00000471979 RGL2O15211 777 aa13.08□□□□□ -0.31
PACRGL-205ENST00000471979 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
PACRGL-205ENST00000471979 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
PACRGL-205ENST00000471979 NPM1P06748 294 aaKnown RBP eCLIP13.05□□□□□ -0.32
PACRGL-205ENST00000471979 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
PACRGL-205ENST00000471979 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
PACRGL-205ENST00000471979 CIZ1Q9ULV3 898 aaPredicted RBP13.04□□□□□ -0.32
PACRGL-205ENST00000471979 HAP1P54257 671 aaPredicted RBP13.01□□□□□ -0.33
PACRGL-205ENST00000471979 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
PACRGL-205ENST00000471979 CLEC11AQ9Y240 323 aa12.96□□□□□ -0.33
PACRGL-205ENST00000471979 REM2Q8IYK8 340 aaPredicted RBP12.95□□□□□ -0.34
PACRGL-205ENST00000471979 BBXQ8WY36 941 aaPredicted RBP12.94□□□□□ -0.34
PACRGL-205ENST00000471979 NUBP1P53384 320 aa12.93□□□□□ -0.34
PACRGL-205ENST00000471979 CREBZFQ9NS37 354 aa12.92□□□□□ -0.34
PACRGL-205ENST00000471979 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
PACRGL-205ENST00000471979 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.89□□□□□ -0.35
PACRGL-205ENST00000471979 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
PACRGL-205ENST00000471979 PAXIP1Q6ZW49 1069 aaPredicted RBP12.86□□□□□ -0.35
PACRGL-205ENST00000471979 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
PACRGL-205ENST00000471979 RNF25Q96BH1 459 aaPredicted RBP12.85□□□□□ -0.35
PACRGL-205ENST00000471979 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
PACRGL-205ENST00000471979 GSE1Q14687 1217 aa12.84□□□□□ -0.35
PACRGL-205ENST00000471979 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
PACRGL-205ENST00000471979 PITPNM1O00562 1244 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms