RNA–Protein interactions for RNA: ENST00000467997.6

PACRGL-204, Transcript of parkin coregulated like, humanhuman

TSL 5

Gene PACRGL, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-204ENST00000467997 NISCHQ9Y2I1 1504 aa54.14■■■■■ 6.26
PACRGL-204ENST00000467997 CCDC180Q9P1Z9 1646 aa48.17■■■■■ 5.3
PACRGL-204ENST00000467997 ABCC9O60706 1549 aa47.14■■■■■ 5.14
PACRGL-204ENST00000467997 RB1CC1Q8TDY2 1594 aa45.37■■■■■ 4.85
PACRGL-204ENST00000467997 NACADO15069 1562 aa45.31■■■■■ 4.84
PACRGL-204ENST00000467997 DCAF8L2P0C7V8 631 aa45.22■■■■■ 4.83
PACRGL-204ENST00000467997 ZCCHC6Q5VYS8 1495 aaKnown RBP45.12■■■■■ 4.81
PACRGL-204ENST00000467997 MYO15BQ96JP2 1530 aa45.05■■■■■ 4.8
PACRGL-204ENST00000467997 DCAF1Q9Y4B6 1507 aa44.83■■■■■ 4.77
PACRGL-204ENST00000467997 UNC13AQ9UPW8 1703 aa44.24■■■■■ 4.67
PACRGL-204ENST00000467997 PABPN1Q86U42 306 aaKnown RBP eCLIP44.02■■■■■ 4.64
PACRGL-204ENST00000467997 BICRAQ9NZM4 1560 aa43.94■■■■■ 4.62
PACRGL-204ENST00000467997 SCRIBQ14160 1630 aa43.93■■■■■ 4.62
PACRGL-204ENST00000467997 SHROOM4Q9ULL8 1493 aa43.6■■■■■ 4.57
PACRGL-204ENST00000467997 DNAJC5BQ9UF47 199 aa43.22■■■■■ 4.51
PACRGL-204ENST00000467997 EIF4G1Q04637 1599 aaKnown RBP42.82■■■■■ 4.44
PACRGL-204ENST00000467997 CC2D2AQ9P2K1 1620 aa42.63■■■■■ 4.42
PACRGL-204ENST00000467997 CECR2Q9BXF3 1484 aa42.39■■■■■ 4.38
PACRGL-204ENST00000467997 SMARCA4P51532 1647 aa42.02■■■■■ 4.32
PACRGL-204ENST00000467997 BAZ1AQ9NRL2 1556 aaPredicted RBP42■■■■■ 4.31
PACRGL-204ENST00000467997 ATAD2BQ9ULI0 1458 aa41.81■■■■■ 4.28
PACRGL-204ENST00000467997 SMARCA2P51531 1590 aa41.8■■■■■ 4.28
PACRGL-204ENST00000467997 NCAPD3P42695 1498 aa41.79■■■■■ 4.28
PACRGL-204ENST00000467997 MROH2BQ7Z745 1585 aa41.7■■■■■ 4.27
PACRGL-204ENST00000467997 PEG3Q9GZU2 1588 aa41.63■■■■■ 4.25
PACRGL-204ENST00000467997 HMGXB3Q12766 1538 aa41.62■■■■■ 4.25
PACRGL-204ENST00000467997 BAZ1BQ9UIG0 1483 aaKnown RBP41.49■■■■■ 4.23
PACRGL-204ENST00000467997 WIZO95785 1651 aa41.23■■■■■ 4.19
PACRGL-204ENST00000467997 RSF1Q96T23 1441 aaPredicted RBP41.23■■■■■ 4.19
PACRGL-204ENST00000467997 TOP2AP11388 1531 aaKnown RBP40.86■■■■■ 4.13
PACRGL-204ENST00000467997 NESP48681 1621 aa40.76■■■■■ 4.12
PACRGL-204ENST00000467997 LAMC3Q9Y6N6 1575 aa40.72■■■■■ 4.11
PACRGL-204ENST00000467997 ERCC6Q03468 1493 aa40.69■■■■■ 4.1
PACRGL-204ENST00000467997 CADPSQ9ULU8 1353 aa40.58■■■■■ 4.09
PACRGL-204ENST00000467997 PDS5BQ9NTI5 1447 aa40.46■■■■■ 4.07
PACRGL-204ENST00000467997 CCDC88BA6NC98 1476 aa40.34■■■■■ 4.05
PACRGL-204ENST00000467997 CFTRP13569 1480 aa40.33■■■■■ 4.05
PACRGL-204ENST00000467997 KIF21AQ7Z4S6 1674 aa40.27■■■■■ 4.04
PACRGL-204ENST00000467997 CUX2O14529 1486 aa40.27■■■■■ 4.04
PACRGL-204ENST00000467997 THOC2Q8NI27 1593 aaKnown RBP40.18■■■■■ 4.02
PACRGL-204ENST00000467997 SUPT5HO00267 1087 aaKnown RBP40.14■■■■■ 4.02
PACRGL-204ENST00000467997 FANCD2Q9BXW9 1451 aa40.12■■■■■ 4.01
PACRGL-204ENST00000467997 CEP164Q9UPV0 1460 aa40.09■■■■■ 4.01
PACRGL-204ENST00000467997 MRC2Q9UBG0 1479 aa40.04■■■■■ 4
PACRGL-204ENST00000467997 PRDM2Q13029 1718 aa40■■■■□ 3.99
PACRGL-204ENST00000467997 WDR62O43379 1518 aa39.89■■■■□ 3.98
PACRGL-204ENST00000467997 URB2Q14146 1524 aaKnown RBP39.69■■■■□ 3.94
PACRGL-204ENST00000467997 ABCC8Q09428 1581 aa39.5■■■■□ 3.91
PACRGL-204ENST00000467997 TOPBP1Q92547 1522 aa39.46■■■■□ 3.91
PACRGL-204ENST00000467997 DNMBPQ6XZF7 1577 aa39.43■■■■□ 3.9
PACRGL-204ENST00000467997 IFT140Q96RY7 1462 aa39.25■■■■□ 3.87
PACRGL-204ENST00000467997 CUX1P39880 1505 aa39.14■■■■□ 3.86
PACRGL-204ENST00000467997 POLA1P09884 1462 aaPredicted RBP39.13■■■■□ 3.85
PACRGL-204ENST00000467997 FGD5Q6ZNL6 1462 aa39.03■■■■□ 3.84
PACRGL-204ENST00000467997 DNAJC5Q9H3Z4 198 aa39.02■■■■□ 3.84
PACRGL-204ENST00000467997 ZNF608Q9ULD9 1512 aaPredicted RBP39.02■■■■□ 3.84
PACRGL-204ENST00000467997 TARBP1Q13395 1621 aaKnown RBP39.01■■■■□ 3.84
PACRGL-204ENST00000467997 SOGA1O94964 1423 aa38.96■■■■□ 3.83
PACRGL-204ENST00000467997 RAD54L2Q9Y4B4 1467 aa38.93■■■■□ 3.82
PACRGL-204ENST00000467997 WRNQ14191 1432 aaPredicted RBP eCLIP38.91■■■■□ 3.82
PACRGL-204ENST00000467997 EIF4G3O43432 1585 aaKnown RBP38.9■■■■□ 3.82
PACRGL-204ENST00000467997 TOP2BQ02880 1626 aa38.81■■■■□ 3.8
PACRGL-204ENST00000467997 AQRO60306 1485 aaKnown RBP eCLIP38.8■■■■□ 3.8
PACRGL-204ENST00000467997 BIVM-ERCC5R4GMW8 1640 aa38.79■■■■□ 3.8
PACRGL-204ENST00000467997 WDR97A6NE52 1622 aa38.78■■■■□ 3.8
PACRGL-204ENST00000467997 SYNJ1O43426 1573 aa38.77■■■■□ 3.8
PACRGL-204ENST00000467997 TDRD9Q8NDG6 1382 aaKnown RBP38.74■■■■□ 3.79
PACRGL-204ENST00000467997 ABCA10Q8WWZ4 1543 aa38.66■■■■□ 3.78
PACRGL-204ENST00000467997 OSCARQ8IYS5 282 aa38.57■■■■□ 3.76
PACRGL-204ENST00000467997 GRIN2BQ13224 1484 aa38.54■■■■□ 3.76
PACRGL-204ENST00000467997 GAPVD1Q14C86 1478 aa38.53■■■■□ 3.76
PACRGL-204ENST00000467997 ABCA5Q8WWZ7 1642 aa38.49■■■■□ 3.75
PACRGL-204ENST00000467997 SNAPC4Q5SXM2 1469 aa38.48■■■■□ 3.75
PACRGL-204ENST00000467997 MAGI1Q96QZ7 1491 aaPredicted RBP38.46■■■■□ 3.75
PACRGL-204ENST00000467997 PBRM1Q86U86 1689 aa38.42■■■■□ 3.74
PACRGL-204ENST00000467997 CHD1O14646 1710 aa38.37■■■■□ 3.73
PACRGL-204ENST00000467997 FBLN2P98095 1184 aa38.36■■■■□ 3.73
PACRGL-204ENST00000467997 SYNJ2O15056 1496 aa38.29■■■■□ 3.72
PACRGL-204ENST00000467997 CHMP7Q8WUX9 453 aaPredicted RBP38.28■■■■□ 3.72
PACRGL-204ENST00000467997 ERICH3Q5RHP9 1530 aa38.21■■■■□ 3.71
PACRGL-204ENST00000467997 ADAMTS12P58397 1594 aa38.15■■■■□ 3.7
PACRGL-204ENST00000467997 KIF27Q86VH2 1401 aa38.11■■■■□ 3.69
PACRGL-204ENST00000467997 FHAD1B1AJZ9 1412 aa38.1■■■■□ 3.69
PACRGL-204ENST00000467997 GRIN2AQ12879 1464 aa38.03■■■■□ 3.68
PACRGL-204ENST00000467997 CLASP1Q7Z460 1538 aa38■■■■□ 3.67
PACRGL-204ENST00000467997 TRIM41Q8WV44 630 aa37.95■■■■□ 3.67
PACRGL-204ENST00000467997 ARHGEF11O15085 1522 aa37.94■■■■□ 3.66
PACRGL-204ENST00000467997 RIMBP3CA6NJZ7 1639 aa37.93■■■■□ 3.66
PACRGL-204ENST00000467997 RIMBP3BA6NNM3 1639 aa37.93■■■■□ 3.66
PACRGL-204ENST00000467997 RIMBP3Q9UFD9 1639 aa37.93■■■■□ 3.66
PACRGL-204ENST00000467997 IGF1RP08069 1367 aa37.91■■■■□ 3.66
PACRGL-204ENST00000467997 NUP160Q12769 1436 aa37.87■■■■□ 3.65
PACRGL-204ENST00000467997 CUL7Q14999 1698 aa37.86■■■■□ 3.65
PACRGL-204ENST00000467997 CEP170Q5SW79 1584 aa37.82■■■■□ 3.64
PACRGL-204ENST00000467997 CARMIL1Q5VZK9 1371 aa37.71■■■■□ 3.63
PACRGL-204ENST00000467997 RUSC2Q8N2Y8 1516 aa37.65■■■■□ 3.62
PACRGL-204ENST00000467997 ARAP1Q96P48 1450 aa37.63■■■■□ 3.61
PACRGL-204ENST00000467997 CYB5RLQ6IPT4 315 aa37.57■■■■□ 3.61
PACRGL-204ENST00000467997 SHROOM2Q13796 1616 aa37.56■■■■□ 3.6
PACRGL-204ENST00000467997 KIAA0586Q9BVV6 1533 aa37.5■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms