Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC30.04■■■□□ 2.4
SPG7Q9UQ90 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
SPG7Q9UQ90 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SPG7Q9UQ90 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SPG7Q9UQ90 AC099791.1-201ENST00000416440 715 ntBASIC30.04■■■□□ 2.4
SPG7Q9UQ90 AC097381.1-201ENST00000429019 1296 ntBASIC30.04■■■□□ 2.4
SPG7Q9UQ90 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC30.04■■■□□ 2.4
SPG7Q9UQ90 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SPG7Q9UQ90 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SPG7Q9UQ90 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
SPG7Q9UQ90 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SPG7Q9UQ90 AL161729.1-201ENST00000604104 1402 ntBASIC30.04■■■□□ 2.4
SPG7Q9UQ90 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SPG7Q9UQ90 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SPG7Q9UQ90 CD37-213ENST00000598095 1598 ntTSL 2 BASIC30.03■■■□□ 2.4
SPG7Q9UQ90 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SPG7Q9UQ90 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.03■■■□□ 2.4
SPG7Q9UQ90 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SPG7Q9UQ90 AC006455.2-201ENST00000429931 906 ntBASIC30.03■■■□□ 2.4
SPG7Q9UQ90 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC30.03■■■□□ 2.4
SPG7Q9UQ90 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SPG7Q9UQ90 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SPG7Q9UQ90 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
SPG7Q9UQ90 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SPG7Q9UQ90 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.02■■■□□ 2.4
SPG7Q9UQ90 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SPG7Q9UQ90 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SPG7Q9UQ90 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SPG7Q9UQ90 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC30.01■■■□□ 2.39
SPG7Q9UQ90 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SPG7Q9UQ90 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SPG7Q9UQ90 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC30.01■■■□□ 2.39
SPG7Q9UQ90 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SPG7Q9UQ90 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.01■■■□□ 2.39
SPG7Q9UQ90 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SPG7Q9UQ90 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SPG7Q9UQ90 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SPG7Q9UQ90 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SPG7Q9UQ90 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30■■■□□ 2.39
SPG7Q9UQ90 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC30■■■□□ 2.39
SPG7Q9UQ90 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC30■■■□□ 2.39
SPG7Q9UQ90 AC009086.3-201ENST00000623486 1008 ntBASIC30■■■□□ 2.39
SPG7Q9UQ90 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30■■■□□ 2.39
SPG7Q9UQ90 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SPG7Q9UQ90 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
SPG7Q9UQ90 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30■■■□□ 2.39
SPG7Q9UQ90 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30■■■□□ 2.39
SPG7Q9UQ90 IRS3P-201ENST00000223076 1006 ntBASIC29.99■■■□□ 2.39
SPG7Q9UQ90 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SPG7Q9UQ90 MIR3181-201ENST00000578512 73 ntBASIC29.99■■■□□ 2.39
SPG7Q9UQ90 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SPG7Q9UQ90 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
SPG7Q9UQ90 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
SPG7Q9UQ90 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
SPG7Q9UQ90 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SPG7Q9UQ90 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SPG7Q9UQ90 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.98■■■□□ 2.39
SPG7Q9UQ90 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SPG7Q9UQ90 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SPG7Q9UQ90 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
SPG7Q9UQ90 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SPG7Q9UQ90 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SPG7Q9UQ90 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SPG7Q9UQ90 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.97■■■□□ 2.39
SPG7Q9UQ90 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SPG7Q9UQ90 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.97■■■□□ 2.39
SPG7Q9UQ90 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SPG7Q9UQ90 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SPG7Q9UQ90 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.96■■■□□ 2.39
SPG7Q9UQ90 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.96■■■□□ 2.39
SPG7Q9UQ90 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.96■■■□□ 2.39
SPG7Q9UQ90 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
SPG7Q9UQ90 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SPG7Q9UQ90 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SPG7Q9UQ90 AC087623.3-201ENST00000607047 1098 ntBASIC29.96■■■□□ 2.39
SPG7Q9UQ90 AC233992.3-201ENST00000607491 485 ntBASIC29.96■■■□□ 2.39
SPG7Q9UQ90 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SPG7Q9UQ90 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SPG7Q9UQ90 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.96■■■□□ 2.39
SPG7Q9UQ90 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
SPG7Q9UQ90 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SPG7Q9UQ90 HLA-L-211ENST00000482052 1765 ntBASIC29.95■■■□□ 2.39
SPG7Q9UQ90 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SPG7Q9UQ90 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.95■■■□□ 2.39
SPG7Q9UQ90 RHOF-204ENST00000537265 699 ntTSL 2 BASIC29.95■■■□□ 2.39
SPG7Q9UQ90 PLD4-205ENST00000553861 667 ntTSL 2 BASIC29.95■■■□□ 2.39
SPG7Q9UQ90 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.95■■■□□ 2.39
SPG7Q9UQ90 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29.95■■■□□ 2.38
SPG7Q9UQ90 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC29.95■■■□□ 2.38
SPG7Q9UQ90 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SPG7Q9UQ90 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC29.95■■■□□ 2.38
SPG7Q9UQ90 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC29.95■■■□□ 2.38
SPG7Q9UQ90 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
SPG7Q9UQ90 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC29.94■■■□□ 2.38
SPG7Q9UQ90 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SPG7Q9UQ90 BX842568.3-201ENST00000418104 571 ntBASIC29.94■■■□□ 2.38
SPG7Q9UQ90 PARL-206ENST00000435888 1098 ntTSL 5 BASIC29.94■■■□□ 2.38
SPG7Q9UQ90 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC29.94■■■□□ 2.38
SPG7Q9UQ90 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SPG7Q9UQ90 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms