Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF407Q9C0G0 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.58■□□□□ 0.88
ZNF407Q9C0G0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
ZNF407Q9C0G0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF407Q9C0G0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.58■□□□□ 0.88
ZNF407Q9C0G0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.58■□□□□ 0.88
ZNF407Q9C0G0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 AF213884.3-201ENST00000563833 479 ntBASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF407Q9C0G0 SYT6-210ENST00000641643 1587 ntBASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 DUX4L19-201ENST00000557448 1267 ntBASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF407Q9C0G0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 EDA-201ENST00000338901 1233 ntBASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 AC142381.2-201ENST00000566120 298 ntBASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
ZNF407Q9C0G0 AC138932.3-201ENST00000567634 1902 ntBASIC20.54■□□□□ 0.88
ZNF407Q9C0G0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF407Q9C0G0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF407Q9C0G0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.54■□□□□ 0.88
ZNF407Q9C0G0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF407Q9C0G0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF407Q9C0G0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF407Q9C0G0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF407Q9C0G0 SERBP1P1-201ENST00000396021 1160 ntBASIC20.54■□□□□ 0.88
ZNF407Q9C0G0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF407Q9C0G0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF407Q9C0G0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF407Q9C0G0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF407Q9C0G0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF407Q9C0G0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF407Q9C0G0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF407Q9C0G0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF407Q9C0G0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZNF407Q9C0G0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF407Q9C0G0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF407Q9C0G0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF407Q9C0G0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF407Q9C0G0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF407Q9C0G0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF407Q9C0G0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF407Q9C0G0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF407Q9C0G0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.52■□□□□ 0.87
ZNF407Q9C0G0 AP001330.3-201ENST00000520123 633 ntBASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 SRD5A1P1-201ENST00000442297 786 ntBASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ZNF407Q9C0G0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF407Q9C0G0 AL136162.1-201ENST00000607711 1078 ntBASIC20.5■□□□□ 0.87
ZNF407Q9C0G0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF407Q9C0G0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF407Q9C0G0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF407Q9C0G0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF407Q9C0G0 AC026271.2-201ENST00000428091 497 ntBASIC20.5■□□□□ 0.87
ZNF407Q9C0G0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms