Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 AC006455.2-201ENST00000429931 906 ntBASIC17.88■□□□□ 0.45
LINC01006Q8NI28 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01006Q8NI28 AC145676.1-201ENST00000514988 2004 ntBASIC17.88■□□□□ 0.45
LINC01006Q8NI28 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 AC091060.1-201ENST00000623524 1766 ntBASIC17.87■□□□□ 0.45
LINC01006Q8NI28 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 AC087623.3-201ENST00000607047 1098 ntBASIC17.87■□□□□ 0.45
LINC01006Q8NI28 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 AC009086.3-201ENST00000623486 1008 ntBASIC17.87■□□□□ 0.45
LINC01006Q8NI28 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01006Q8NI28 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01006Q8NI28 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LINC01006Q8NI28 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.86■□□□□ 0.45
LINC01006Q8NI28 MIR3181-201ENST00000578512 73 ntBASIC17.86■□□□□ 0.45
LINC01006Q8NI28 AC233992.3-201ENST00000607491 485 ntBASIC17.86■□□□□ 0.45
LINC01006Q8NI28 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
LINC01006Q8NI28 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01006Q8NI28 AL161729.1-201ENST00000604104 1402 ntBASIC17.86■□□□□ 0.45
LINC01006Q8NI28 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01006Q8NI28 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC01006Q8NI28 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC01006Q8NI28 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01006Q8NI28 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01006Q8NI28 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01006Q8NI28 BX842568.3-201ENST00000418104 571 ntBASIC17.85■□□□□ 0.45
LINC01006Q8NI28 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01006Q8NI28 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01006Q8NI28 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01006Q8NI28 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01006Q8NI28 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01006Q8NI28 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01006Q8NI28 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01006Q8NI28 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01006Q8NI28 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01006Q8NI28 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01006Q8NI28 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01006Q8NI28 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
LINC01006Q8NI28 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 AL162430.1-201ENST00000480705 870 ntBASIC17.83■□□□□ 0.44
LINC01006Q8NI28 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01006Q8NI28 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC01006Q8NI28 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
LINC01006Q8NI28 HLA-L-211ENST00000482052 1765 ntBASIC17.82■□□□□ 0.44
LINC01006Q8NI28 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms