Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC011767.1-201ENST00000617410 1153 ntBASIC12.83□□□□□ -0.36
UBR4Q5T4S7 C17orf82-201ENST00000623772 1530 ntBASIC12.83□□□□□ -0.36
UBR4Q5T4S7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.83□□□□□ -0.36
UBR4Q5T4S7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBR4Q5T4S7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
UBR4Q5T4S7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBR4Q5T4S7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBR4Q5T4S7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.83□□□□□ -0.36
UBR4Q5T4S7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.83□□□□□ -0.36
UBR4Q5T4S7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC12.83□□□□□ -0.36
UBR4Q5T4S7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC12.82□□□□□ -0.36
UBR4Q5T4S7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC12.82□□□□□ -0.36
UBR4Q5T4S7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBR4Q5T4S7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
UBR4Q5T4S7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBR4Q5T4S7 AC098934.4-201ENST00000564127 592 ntBASIC12.82□□□□□ -0.36
UBR4Q5T4S7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBR4Q5T4S7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBR4Q5T4S7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UBR4Q5T4S7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC12.82□□□□□ -0.36
UBR4Q5T4S7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
UBR4Q5T4S7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBR4Q5T4S7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
UBR4Q5T4S7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC12.81□□□□□ -0.36
UBR4Q5T4S7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBR4Q5T4S7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.81□□□□□ -0.36
UBR4Q5T4S7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBR4Q5T4S7 TSPY6P-201ENST00000448518 926 ntBASIC12.81□□□□□ -0.36
UBR4Q5T4S7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC12.81□□□□□ -0.36
UBR4Q5T4S7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
UBR4Q5T4S7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBR4Q5T4S7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC12.81□□□□□ -0.36
UBR4Q5T4S7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBR4Q5T4S7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBR4Q5T4S7 FP325331.1-202ENST00000623531 1380 ntBASIC12.8□□□□□ -0.36
UBR4Q5T4S7 AC083906.2-201ENST00000511578 360 ntBASIC12.8□□□□□ -0.36
UBR4Q5T4S7 AC073912.3-201ENST00000624414 853 ntBASIC12.8□□□□□ -0.36
UBR4Q5T4S7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBR4Q5T4S7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
UBR4Q5T4S7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBR4Q5T4S7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBR4Q5T4S7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.8□□□□□ -0.36
UBR4Q5T4S7 MDK-213ENST00000617138 635 ntTSL 2 BASIC12.8□□□□□ -0.36
UBR4Q5T4S7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBR4Q5T4S7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC12.8□□□□□ -0.36
UBR4Q5T4S7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.8□□□□□ -0.36
UBR4Q5T4S7 AL121894.2-201ENST00000602977 491 ntBASIC12.8□□□□□ -0.36
UBR4Q5T4S7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 RPS2P4-201ENST00000476944 856 ntBASIC12.79□□□□□ -0.36
UBR4Q5T4S7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 ABCB10P3-201ENST00000561950 2166 ntBASIC12.79□□□□□ -0.36
UBR4Q5T4S7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBR4Q5T4S7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 MIR3181-201ENST00000578512 73 ntBASIC12.78□□□□□ -0.36
UBR4Q5T4S7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC12.78□□□□□ -0.36
UBR4Q5T4S7 AL354811.1-201ENST00000610286 706 ntBASIC12.77□□□□□ -0.36
UBR4Q5T4S7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBR4Q5T4S7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBR4Q5T4S7 TPM4P1-201ENST00000436100 807 ntBASIC12.77□□□□□ -0.36
UBR4Q5T4S7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.77□□□□□ -0.36
UBR4Q5T4S7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBR4Q5T4S7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.77□□□□□ -0.37
UBR4Q5T4S7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC12.77□□□□□ -0.37
UBR4Q5T4S7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC12.77□□□□□ -0.37
UBR4Q5T4S7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBR4Q5T4S7 COX20-201ENST00000366528 568 ntTSL 2 BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.76□□□□□ -0.37
UBR4Q5T4S7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 HES6-206ENST00000409574 738 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms