RNA–Protein interactions for RNA: ENST00000507528.5

PDCD6-206, Transcript of programmed cell death 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDCD6, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-206ENST00000507528 NISCHQ9Y2I1 1504 aa48.49■■■■■ 5.35
PDCD6-206ENST00000507528 ABCC9O60706 1549 aa43.99■■■■■ 4.63
PDCD6-206ENST00000507528 CCDC180Q9P1Z9 1646 aa43.73■■■■■ 4.59
PDCD6-206ENST00000507528 RB1CC1Q8TDY2 1594 aa41.76■■■■■ 4.28
PDCD6-206ENST00000507528 DNAJC5BQ9UF47 199 aa41.6■■■■■ 4.25
PDCD6-206ENST00000507528 NACADO15069 1562 aa41.4■■■■■ 4.22
PDCD6-206ENST00000507528 DCAF8L2P0C7V8 631 aa40.94■■■■■ 4.14
PDCD6-206ENST00000507528 UNC13AQ9UPW8 1703 aa40.9■■■■■ 4.14
PDCD6-206ENST00000507528 PABPN1Q86U42 306 aaKnown RBP eCLIP40.85■■■■■ 4.13
PDCD6-206ENST00000507528 MYO15BQ96JP2 1530 aa40.74■■■■■ 4.11
PDCD6-206ENST00000507528 BICRAQ9NZM4 1560 aa40.6■■■■■ 4.09
PDCD6-206ENST00000507528 ZCCHC6Q5VYS8 1495 aaKnown RBP40.12■■■■■ 4.01
PDCD6-206ENST00000507528 DCAF1Q9Y4B6 1507 aa40.07■■■■■ 4.01
PDCD6-206ENST00000507528 SHROOM4Q9ULL8 1493 aa40■■■■□ 3.99
PDCD6-206ENST00000507528 CC2D2AQ9P2K1 1620 aa39.77■■■■□ 3.96
PDCD6-206ENST00000507528 SCRIBQ14160 1630 aa39.74■■■■□ 3.95
PDCD6-206ENST00000507528 CECR2Q9BXF3 1484 aa39.68■■■■□ 3.94
PDCD6-206ENST00000507528 EIF4G1Q04637 1599 aaKnown RBP39.6■■■■□ 3.93
PDCD6-206ENST00000507528 DNAJC5Q9H3Z4 198 aa38.48■■■■□ 3.75
PDCD6-206ENST00000507528 NCAPD3P42695 1498 aa38.22■■■■□ 3.71
PDCD6-206ENST00000507528 CUX2O14529 1486 aa38.1■■■■□ 3.69
PDCD6-206ENST00000507528 ATAD2BQ9ULI0 1458 aa38.03■■■■□ 3.68
PDCD6-206ENST00000507528 ERCC6Q03468 1493 aa37.98■■■■□ 3.67
PDCD6-206ENST00000507528 SMARCA4P51532 1647 aa37.92■■■■□ 3.66
PDCD6-206ENST00000507528 HMGXB3Q12766 1538 aa37.92■■■■□ 3.66
PDCD6-206ENST00000507528 SMARCA2P51531 1590 aa37.91■■■■□ 3.66
PDCD6-206ENST00000507528 NESP48681 1621 aa37.7■■■■□ 3.63
PDCD6-206ENST00000507528 BAZ1AQ9NRL2 1556 aaPredicted RBP37.67■■■■□ 3.62
PDCD6-206ENST00000507528 BAZ1BQ9UIG0 1483 aaKnown RBP37.62■■■■□ 3.61
PDCD6-206ENST00000507528 PEG3Q9GZU2 1588 aa37.59■■■■□ 3.61
PDCD6-206ENST00000507528 THOC2Q8NI27 1593 aaKnown RBP37.45■■■■□ 3.59
PDCD6-206ENST00000507528 LAMC3Q9Y6N6 1575 aa37.42■■■■□ 3.58
PDCD6-206ENST00000507528 MROH2BQ7Z745 1585 aa37.35■■■■□ 3.57
PDCD6-206ENST00000507528 KIF21AQ7Z4S6 1674 aa37.26■■■■□ 3.56
PDCD6-206ENST00000507528 PDS5BQ9NTI5 1447 aa37.17■■■■□ 3.54
PDCD6-206ENST00000507528 CADPSQ9ULU8 1353 aa37.01■■■■□ 3.51
PDCD6-206ENST00000507528 WIZO95785 1651 aa36.9■■■■□ 3.5
PDCD6-206ENST00000507528 MRC2Q9UBG0 1479 aa36.88■■■■□ 3.5
PDCD6-206ENST00000507528 WDR62O43379 1518 aa36.84■■■■□ 3.49
PDCD6-206ENST00000507528 CEP164Q9UPV0 1460 aa36.66■■■■□ 3.46
PDCD6-206ENST00000507528 FANCD2Q9BXW9 1451 aa36.58■■■■□ 3.45
PDCD6-206ENST00000507528 TRIM41Q8WV44 630 aa36.56■■■■□ 3.44
PDCD6-206ENST00000507528 CFTRP13569 1480 aa36.53■■■■□ 3.44
PDCD6-206ENST00000507528 RSF1Q96T23 1441 aaPredicted RBP36.43■■■■□ 3.42
PDCD6-206ENST00000507528 TOP2AP11388 1531 aaKnown RBP36.4■■■■□ 3.42
PDCD6-206ENST00000507528 URB2Q14146 1524 aaKnown RBP36.33■■■■□ 3.41
PDCD6-206ENST00000507528 OSCARQ8IYS5 282 aa36.25■■■■□ 3.39
PDCD6-206ENST00000507528 PRDM2Q13029 1718 aa36.21■■■■□ 3.39
PDCD6-206ENST00000507528 CCDC88BA6NC98 1476 aa35.98■■■■□ 3.35
PDCD6-206ENST00000507528 IFT140Q96RY7 1462 aa35.94■■■■□ 3.34
PDCD6-206ENST00000507528 ZNF608Q9ULD9 1512 aaPredicted RBP35.93■■■■□ 3.34
PDCD6-206ENST00000507528 RIMBP3CA6NJZ7 1639 aa35.89■■■■□ 3.34
PDCD6-206ENST00000507528 RIMBP3BA6NNM3 1639 aa35.89■■■■□ 3.34
PDCD6-206ENST00000507528 RIMBP3Q9UFD9 1639 aa35.89■■■■□ 3.34
PDCD6-206ENST00000507528 TOPBP1Q92547 1522 aa35.87■■■■□ 3.33
PDCD6-206ENST00000507528 ABCC8Q09428 1581 aa35.77■■■■□ 3.32
PDCD6-206ENST00000507528 EIF4G3O43432 1585 aaKnown RBP35.74■■■■□ 3.31
PDCD6-206ENST00000507528 ARHGEF11O15085 1522 aa35.72■■■■□ 3.31
PDCD6-206ENST00000507528 DNMBPQ6XZF7 1577 aa35.72■■■■□ 3.31
PDCD6-206ENST00000507528 TARBP1Q13395 1621 aaKnown RBP35.62■■■■□ 3.29
PDCD6-206ENST00000507528 CHD1O14646 1710 aa35.56■■■■□ 3.28
PDCD6-206ENST00000507528 AQRO60306 1485 aaKnown RBP eCLIP35.54■■■■□ 3.281e-6■■■■□ 25.2
PDCD6-206ENST00000507528 POLA1P09884 1462 aaPredicted RBP35.48■■■■□ 3.27
PDCD6-206ENST00000507528 CYB5RLQ6IPT4 315 aa35.41■■■■□ 3.26
PDCD6-206ENST00000507528 ARAP1Q96P48 1450 aa35.34■■■■□ 3.25
PDCD6-206ENST00000507528 RAD54L2Q9Y4B4 1467 aa35.33■■■■□ 3.25
PDCD6-206ENST00000507528 FBLN2P98095 1184 aa35.3■■■■□ 3.24
PDCD6-206ENST00000507528 SOGA1O94964 1423 aa35.28■■■■□ 3.24
PDCD6-206ENST00000507528 TDRD9Q8NDG6 1382 aaKnown RBP35.25■■■■□ 3.23
PDCD6-206ENST00000507528 WDR97A6NE52 1622 aa35.24■■■■□ 3.23
PDCD6-206ENST00000507528 FGD5Q6ZNL6 1462 aa35.19■■■■□ 3.22
PDCD6-206ENST00000507528 SNAPC4Q5SXM2 1469 aa35.16■■■■□ 3.22
PDCD6-206ENST00000507528 CLASP1Q7Z460 1538 aa35.14■■■■□ 3.22
PDCD6-206ENST00000507528 CUX1P39880 1505 aa35.11■■■■□ 3.21
PDCD6-206ENST00000507528 TRHP20396 242 aaPredicted RBP35.1■■■■□ 3.21
PDCD6-206ENST00000507528 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
PDCD6-206ENST00000507528 SYNJ1O43426 1573 aa35.05■■■■□ 3.2
PDCD6-206ENST00000507528 GRIN2BQ13224 1484 aa35.03■■■■□ 3.2
PDCD6-206ENST00000507528 CHMP7Q8WUX9 453 aaPredicted RBP35.01■■■■□ 3.2
PDCD6-206ENST00000507528 SYNJ2O15056 1496 aa34.97■■■■□ 3.19
PDCD6-206ENST00000507528 PBRM1Q86U86 1689 aa34.92■■■■□ 3.18
PDCD6-206ENST00000507528 GAPVD1Q14C86 1478 aa34.85■■■■□ 3.17
PDCD6-206ENST00000507528 ABCA5Q8WWZ7 1642 aa34.8■■■■□ 3.16
PDCD6-206ENST00000507528 ABCA10Q8WWZ4 1543 aa34.79■■■■□ 3.16
PDCD6-206ENST00000507528 GRIN2AQ12879 1464 aa34.59■■■■□ 3.13
PDCD6-206ENST00000507528 ADAMTS12P58397 1594 aa34.54■■■■□ 3.12
PDCD6-206ENST00000507528 ERCC6L2Q5T890 1561 aa34.54■■■■□ 3.12
PDCD6-206ENST00000507528 WRNQ14191 1432 aaPredicted RBP eCLIP34.54■■■■□ 3.125e-6■■■■■ 33.4
PDCD6-206ENST00000507528 CEP170Q5SW79 1584 aa34.5■■■■□ 3.11
PDCD6-206ENST00000507528 NUP160Q12769 1436 aa34.5■■■■□ 3.11
PDCD6-206ENST00000507528 BIVM-ERCC5R4GMW8 1640 aa34.5■■■■□ 3.11
PDCD6-206ENST00000507528 TOP2BQ02880 1626 aa34.48■■■■□ 3.11
PDCD6-206ENST00000507528 SHROOM2Q13796 1616 aa34.44■■■■□ 3.1
PDCD6-206ENST00000507528 SUPT5HO00267 1087 aaKnown RBP34.43■■■■□ 3.1
PDCD6-206ENST00000507528 FHAD1B1AJZ9 1412 aa34.39■■■■□ 3.1
PDCD6-206ENST00000507528 ERICH3Q5RHP9 1530 aa34.35■■■■□ 3.09
PDCD6-206ENST00000507528 AEBP2Q6ZN18 517 aaPredicted RBP34.34■■■■□ 3.09
PDCD6-206ENST00000507528 KIF13AQ9H1H9 1805 aa34.19■■■■□ 3.06
PDCD6-206ENST00000507528 PRG4Q92954 1404 aaPredicted RBP34.15■■■■□ 3.06
PDCD6-206ENST00000507528 JPH4Q96JJ6 628 aa34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms