Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 AL022069.1-201ENST00000568025 1636 ntBASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV5-5A0A0J9YX44 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV5-5A0A0J9YX44 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV5-5A0A0J9YX44 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV5-5A0A0J9YX44 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV5-5A0A0J9YX44 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.83■□□□□ 0.77
TRBV5-5A0A0J9YX44 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.83■□□□□ 0.76
TRBV5-5A0A0J9YX44 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV5-5A0A0J9YX44 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
TRBV5-5A0A0J9YX44 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 SPCS2P3-201ENST00000500401 656 ntBASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 AC018755.3-202ENST00000596210 929 ntBASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 GUSBP5-202ENST00000510805 1989 ntBASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 LINC00526-201ENST00000581067 1875 ntBASIC19.82■□□□□ 0.76
TRBV5-5A0A0J9YX44 LINC00565-201ENST00000562710 2331 ntBASIC19.81■□□□□ 0.76
TRBV5-5A0A0J9YX44 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-5A0A0J9YX44 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
TRBV5-5A0A0J9YX44 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-5A0A0J9YX44 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.81■□□□□ 0.76
TRBV5-5A0A0J9YX44 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRBV5-5A0A0J9YX44 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-5A0A0J9YX44 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRBV5-5A0A0J9YX44 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-5A0A0J9YX44 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-5A0A0J9YX44 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-5A0A0J9YX44 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 ECEL1P1-201ENST00000373592 1742 ntBASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRBV5-5A0A0J9YX44 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 MIR4449-201ENST00000578365 66 ntBASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-5A0A0J9YX44 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
TRBV5-5A0A0J9YX44 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV5-5A0A0J9YX44 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV5-5A0A0J9YX44 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV5-5A0A0J9YX44 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
TRBV5-5A0A0J9YX44 AL592293.1-201ENST00000502889 1188 ntBASIC19.77■□□□□ 0.76
TRBV5-5A0A0J9YX44 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
TRBV5-5A0A0J9YX44 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV5-5A0A0J9YX44 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV5-5A0A0J9YX44 ALDH1A3-203ENST00000557963 1670 ntBASIC19.77■□□□□ 0.76
TRBV5-5A0A0J9YX44 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV5-5A0A0J9YX44 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TRBV5-5A0A0J9YX44 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRBV5-5A0A0J9YX44 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRBV5-5A0A0J9YX44 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV5-5A0A0J9YX44 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms