Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
ZNF428Q96B54 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
ZNF428Q96B54 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC29.59■■■□□ 2.33
ZNF428Q96B54 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
ZNF428Q96B54 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ZNF428Q96B54 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
ZNF428Q96B54 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ZNF428Q96B54 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.58■■■□□ 2.33
ZNF428Q96B54 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29.58■■■□□ 2.33
ZNF428Q96B54 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC29.58■■■□□ 2.33
ZNF428Q96B54 LSM7-203ENST00000585409 512 ntTSL 2 BASIC29.58■■■□□ 2.33
ZNF428Q96B54 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
ZNF428Q96B54 AC004812.2-201ENST00000611079 2094 ntBASIC29.57■■■□□ 2.32
ZNF428Q96B54 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC29.57■■■□□ 2.32
ZNF428Q96B54 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
ZNF428Q96B54 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
ZNF428Q96B54 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.57■■■□□ 2.32
ZNF428Q96B54 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
ZNF428Q96B54 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZNF428Q96B54 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC29.56■■■□□ 2.32
ZNF428Q96B54 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZNF428Q96B54 AC131281.2-201ENST00000520478 145 ntBASIC29.56■■■□□ 2.32
ZNF428Q96B54 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.56■■■□□ 2.32
ZNF428Q96B54 MTDHP2-201ENST00000601468 714 ntBASIC29.56■■■□□ 2.32
ZNF428Q96B54 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZNF428Q96B54 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
ZNF428Q96B54 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
ZNF428Q96B54 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.55■■■□□ 2.32
ZNF428Q96B54 AC019069.1-201ENST00000610008 1333 ntBASIC29.55■■■□□ 2.32
ZNF428Q96B54 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
ZNF428Q96B54 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.55■■■□□ 2.32
ZNF428Q96B54 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
ZNF428Q96B54 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ZNF428Q96B54 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ZNF428Q96B54 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
ZNF428Q96B54 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC29.54■■■□□ 2.32
ZNF428Q96B54 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
ZNF428Q96B54 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ZNF428Q96B54 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.54■■■□□ 2.32
ZNF428Q96B54 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
ZNF428Q96B54 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC29.54■■■□□ 2.32
ZNF428Q96B54 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
ZNF428Q96B54 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC29.53■■■□□ 2.32
ZNF428Q96B54 SNX5-217ENST00000606557 1087 ntBASIC29.53■■■□□ 2.32
ZNF428Q96B54 AL117332.1-201ENST00000622628 974 ntBASIC29.53■■■□□ 2.32
ZNF428Q96B54 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.53■■■□□ 2.32
ZNF428Q96B54 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ZNF428Q96B54 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
ZNF428Q96B54 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.52■■■□□ 2.32
ZNF428Q96B54 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ZNF428Q96B54 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ZNF428Q96B54 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
ZNF428Q96B54 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
ZNF428Q96B54 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
ZNF428Q96B54 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ZNF428Q96B54 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.51■■■□□ 2.31
ZNF428Q96B54 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.51■■■□□ 2.31
ZNF428Q96B54 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
ZNF428Q96B54 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC29.51■■■□□ 2.31
ZNF428Q96B54 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.5■■■□□ 2.31
ZNF428Q96B54 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ZNF428Q96B54 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.5■■■□□ 2.31
ZNF428Q96B54 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.5■■■□□ 2.31
ZNF428Q96B54 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ZNF428Q96B54 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ZNF428Q96B54 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.49■■■□□ 2.31
ZNF428Q96B54 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ZNF428Q96B54 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.49■■■□□ 2.31
ZNF428Q96B54 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.49■■■□□ 2.31
ZNF428Q96B54 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.49■■■□□ 2.31
ZNF428Q96B54 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ZNF428Q96B54 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
ZNF428Q96B54 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ZNF428Q96B54 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.48■■■□□ 2.31
ZNF428Q96B54 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.48■■■□□ 2.31
ZNF428Q96B54 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.48■■■□□ 2.31
ZNF428Q96B54 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
ZNF428Q96B54 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ZNF428Q96B54 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ZNF428Q96B54 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ZNF428Q96B54 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC29.48■■■□□ 2.31
ZNF428Q96B54 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC29.47■■■□□ 2.31
ZNF428Q96B54 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC29.47■■■□□ 2.31
ZNF428Q96B54 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ZNF428Q96B54 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC29.47■■■□□ 2.31
ZNF428Q96B54 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.47■■■□□ 2.31
ZNF428Q96B54 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.47■■■□□ 2.31
ZNF428Q96B54 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
ZNF428Q96B54 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ZNF428Q96B54 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ZNF428Q96B54 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC29.46■■■□□ 2.31
ZNF428Q96B54 MIR4466-201ENST00000606121 54 ntBASIC29.46■■■□□ 2.31
ZNF428Q96B54 RASSF1-AS1-201ENST00000629828 790 ntBASIC29.46■■■□□ 2.31
ZNF428Q96B54 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.46■■■□□ 2.31
ZNF428Q96B54 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
ZNF428Q96B54 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ZNF428Q96B54 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.45■■■□□ 2.31
ZNF428Q96B54 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
ZNF428Q96B54 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.45■■■□□ 2.31
ZNF428Q96B54 AL136116.3-201ENST00000402907 1138 ntBASIC29.45■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms