Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
LTBP4Q8N2S1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
LTBP4Q8N2S1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
LTBP4Q8N2S1 APTR-205ENST00000447009 902 ntTSL 2 BASIC32.74■■■□□ 2.83
LTBP4Q8N2S1 IGHV3-19-201ENST00000521488 291 ntBASIC32.74■■■□□ 2.83
LTBP4Q8N2S1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC32.74■■■□□ 2.83
LTBP4Q8N2S1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC32.73■■■□□ 2.83
LTBP4Q8N2S1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC32.73■■■□□ 2.83
LTBP4Q8N2S1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC32.73■■■□□ 2.83
LTBP4Q8N2S1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
LTBP4Q8N2S1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC32.73■■■□□ 2.83
LTBP4Q8N2S1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC32.73■■■□□ 2.83
LTBP4Q8N2S1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.72■■■□□ 2.83
LTBP4Q8N2S1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
LTBP4Q8N2S1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC32.72■■■□□ 2.83
LTBP4Q8N2S1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC32.72■■■□□ 2.83
LTBP4Q8N2S1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC32.72■■■□□ 2.83
LTBP4Q8N2S1 MIR4651-201ENST00000582622 73 ntBASIC32.72■■■□□ 2.83
LTBP4Q8N2S1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC32.71■■■□□ 2.83
LTBP4Q8N2S1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC32.71■■■□□ 2.83
LTBP4Q8N2S1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC32.71■■■□□ 2.83
LTBP4Q8N2S1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC32.71■■■□□ 2.83
LTBP4Q8N2S1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC32.71■■■□□ 2.83
LTBP4Q8N2S1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
LTBP4Q8N2S1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.7■■■□□ 2.83
LTBP4Q8N2S1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
LTBP4Q8N2S1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC32.7■■■□□ 2.83
LTBP4Q8N2S1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
LTBP4Q8N2S1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC32.7■■■□□ 2.83
LTBP4Q8N2S1 AC142086.2-201ENST00000569753 217 ntBASIC32.7■■■□□ 2.83
LTBP4Q8N2S1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC32.7■■■□□ 2.83
LTBP4Q8N2S1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
LTBP4Q8N2S1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
LTBP4Q8N2S1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 AC142472.1-201ENST00000612013 1741 ntBASIC32.69■■■□□ 2.82
LTBP4Q8N2S1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
LTBP4Q8N2S1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
LTBP4Q8N2S1 LINC02228-203ENST00000641970 1355 ntBASIC32.68■■■□□ 2.82
LTBP4Q8N2S1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.68■■■□□ 2.82
LTBP4Q8N2S1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
LTBP4Q8N2S1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
LTBP4Q8N2S1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC32.67■■■□□ 2.82
LTBP4Q8N2S1 AC016769.1-201ENST00000409132 1010 ntBASIC32.67■■■□□ 2.82
LTBP4Q8N2S1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC32.67■■■□□ 2.82
LTBP4Q8N2S1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC32.67■■■□□ 2.82
LTBP4Q8N2S1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC32.67■■■□□ 2.82
LTBP4Q8N2S1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
LTBP4Q8N2S1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC32.66■■■□□ 2.82
LTBP4Q8N2S1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.66■■■□□ 2.82
LTBP4Q8N2S1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC32.66■■■□□ 2.82
LTBP4Q8N2S1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
LTBP4Q8N2S1 KRT18P6-201ENST00000555540 1265 ntBASIC32.66■■■□□ 2.82
LTBP4Q8N2S1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
LTBP4Q8N2S1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
LTBP4Q8N2S1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
LTBP4Q8N2S1 AC137761.2-201ENST00000561729 223 ntBASIC32.65■■■□□ 2.82
LTBP4Q8N2S1 AC145350.3-201ENST00000569033 163 ntBASIC32.65■■■□□ 2.82
LTBP4Q8N2S1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC32.65■■■□□ 2.82
LTBP4Q8N2S1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
LTBP4Q8N2S1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
LTBP4Q8N2S1 MIR663A-201ENST00000385250 93 ntBASIC32.64■■■□□ 2.82
LTBP4Q8N2S1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
LTBP4Q8N2S1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC32.64■■■□□ 2.82
LTBP4Q8N2S1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
LTBP4Q8N2S1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
LTBP4Q8N2S1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
LTBP4Q8N2S1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 AC009086.3-201ENST00000623486 1008 ntBASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 REST-206ENST00000612429 1376 ntTSL 5 BASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 REST-207ENST00000616975 1370 ntTSL 5 BASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC32.62■■■□□ 2.81
LTBP4Q8N2S1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
LTBP4Q8N2S1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
LTBP4Q8N2S1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
LTBP4Q8N2S1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
LTBP4Q8N2S1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC32.6■■■□□ 2.81
LTBP4Q8N2S1 NT5C3AP1-201ENST00000394500 1012 ntBASIC32.6■■■□□ 2.81
LTBP4Q8N2S1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC32.6■■■□□ 2.81
LTBP4Q8N2S1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
LTBP4Q8N2S1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
LTBP4Q8N2S1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC32.6■■■□□ 2.81
LTBP4Q8N2S1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC32.59■■■□□ 2.81
LTBP4Q8N2S1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms