Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AL356740.2-201ENST00000601559 647 ntBASIC24.43■■□□□ 1.5
LIMS2Q7Z4I7 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.43■■□□□ 1.5
LIMS2Q7Z4I7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
LIMS2Q7Z4I7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.43■■□□□ 1.5
LIMS2Q7Z4I7 LINC00543-201ENST00000567234 1845 ntBASIC24.42■■□□□ 1.5
LIMS2Q7Z4I7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LIMS2Q7Z4I7 AC141586.4-201ENST00000624558 1573 ntBASIC24.42■■□□□ 1.5
LIMS2Q7Z4I7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LIMS2Q7Z4I7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.42■■□□□ 1.5
LIMS2Q7Z4I7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.42■■□□□ 1.5
LIMS2Q7Z4I7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LIMS2Q7Z4I7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LIMS2Q7Z4I7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LIMS2Q7Z4I7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LIMS2Q7Z4I7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.41■■□□□ 1.5
LIMS2Q7Z4I7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.41■■□□□ 1.5
LIMS2Q7Z4I7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LIMS2Q7Z4I7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LIMS2Q7Z4I7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LIMS2Q7Z4I7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LIMS2Q7Z4I7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LIMS2Q7Z4I7 AC131281.2-201ENST00000520478 145 ntBASIC24.4■■□□□ 1.5
LIMS2Q7Z4I7 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.4■■□□□ 1.5
LIMS2Q7Z4I7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LIMS2Q7Z4I7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LIMS2Q7Z4I7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.39■■□□□ 1.5
LIMS2Q7Z4I7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LIMS2Q7Z4I7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LIMS2Q7Z4I7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.39■■□□□ 1.49
LIMS2Q7Z4I7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
LIMS2Q7Z4I7 ALDH1A3-203ENST00000557963 1670 ntBASIC24.39■■□□□ 1.49
LIMS2Q7Z4I7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
LIMS2Q7Z4I7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
LIMS2Q7Z4I7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
LIMS2Q7Z4I7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
LIMS2Q7Z4I7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.39■■□□□ 1.49
LIMS2Q7Z4I7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LIMS2Q7Z4I7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LIMS2Q7Z4I7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.38■■□□□ 1.49
LIMS2Q7Z4I7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.38■■□□□ 1.49
LIMS2Q7Z4I7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.38■■□□□ 1.49
LIMS2Q7Z4I7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
LIMS2Q7Z4I7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LIMS2Q7Z4I7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LIMS2Q7Z4I7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.37■■□□□ 1.49
LIMS2Q7Z4I7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LIMS2Q7Z4I7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LIMS2Q7Z4I7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.37■■□□□ 1.49
LIMS2Q7Z4I7 MIR4466-201ENST00000606121 54 ntBASIC24.37■■□□□ 1.49
LIMS2Q7Z4I7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.37■■□□□ 1.49
LIMS2Q7Z4I7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LIMS2Q7Z4I7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LIMS2Q7Z4I7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LIMS2Q7Z4I7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.36■■□□□ 1.49
LIMS2Q7Z4I7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LIMS2Q7Z4I7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LIMS2Q7Z4I7 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.36■■□□□ 1.49
LIMS2Q7Z4I7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.36■■□□□ 1.49
LIMS2Q7Z4I7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
LIMS2Q7Z4I7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LIMS2Q7Z4I7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.36■■□□□ 1.49
LIMS2Q7Z4I7 LINC01124-201ENST00000409786 2117 ntBASIC24.35■■□□□ 1.49
LIMS2Q7Z4I7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.35■■□□□ 1.49
LIMS2Q7Z4I7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.35■■□□□ 1.49
LIMS2Q7Z4I7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.35■■□□□ 1.49
LIMS2Q7Z4I7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LIMS2Q7Z4I7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LIMS2Q7Z4I7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.33■■□□□ 1.49
LIMS2Q7Z4I7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LIMS2Q7Z4I7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LIMS2Q7Z4I7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LIMS2Q7Z4I7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
LIMS2Q7Z4I7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
LIMS2Q7Z4I7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LIMS2Q7Z4I7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LIMS2Q7Z4I7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
LIMS2Q7Z4I7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
LIMS2Q7Z4I7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LIMS2Q7Z4I7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.32■■□□□ 1.48
LIMS2Q7Z4I7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LIMS2Q7Z4I7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LIMS2Q7Z4I7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
LIMS2Q7Z4I7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.31■■□□□ 1.48
LIMS2Q7Z4I7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.31■■□□□ 1.48
LIMS2Q7Z4I7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
LIMS2Q7Z4I7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms