Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM11AP58511 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.04■□□□□ 0.96
SMIM11AP58511 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM11AP58511 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM11AP58511 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM11AP58511 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SMIM11AP58511 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM11AP58511 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.04■□□□□ 0.96
SMIM11AP58511 AC092068.2-201ENST00000590491 1708 ntBASIC21.04■□□□□ 0.96
SMIM11AP58511 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM11AP58511 C9orf163-202ENST00000624034 2573 ntBASIC21.03■□□□□ 0.96
SMIM11AP58511 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM11AP58511 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.03■□□□□ 0.96
SMIM11AP58511 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM11AP58511 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SMIM11AP58511 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SMIM11AP58511 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM11AP58511 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SMIM11AP58511 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.03■□□□□ 0.96
SMIM11AP58511 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM11AP58511 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM11AP58511 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM11AP58511 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM11AP58511 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SMIM11AP58511 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM11AP58511 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM11AP58511 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.02■□□□□ 0.96
SMIM11AP58511 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM11AP58511 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SMIM11AP58511 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SMIM11AP58511 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM11AP58511 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM11AP58511 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.02■□□□□ 0.96
SMIM11AP58511 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM11AP58511 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM11AP58511 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM11AP58511 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM11AP58511 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.02■□□□□ 0.96
SMIM11AP58511 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM11AP58511 AC087393.1-201ENST00000582896 145 ntBASIC21.02■□□□□ 0.96
SMIM11AP58511 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SMIM11AP58511 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM11AP58511 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM11AP58511 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM11AP58511 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMIM11AP58511 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM11AP58511 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.01■□□□□ 0.95
SMIM11AP58511 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SMIM11AP58511 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM11AP58511 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.01■□□□□ 0.95
SMIM11AP58511 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.01■□□□□ 0.95
SMIM11AP58511 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM11AP58511 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.01■□□□□ 0.95
SMIM11AP58511 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM11AP58511 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
SMIM11AP58511 RNF126P1-201ENST00000567452 1320 ntBASIC21.01■□□□□ 0.95
SMIM11AP58511 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM11AP58511 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM11AP58511 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM11AP58511 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.01■□□□□ 0.95
SMIM11AP58511 AL022069.1-201ENST00000568025 1636 ntBASIC21■□□□□ 0.95
SMIM11AP58511 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21■□□□□ 0.95
SMIM11AP58511 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21■□□□□ 0.95
SMIM11AP58511 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM11AP58511 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM11AP58511 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMIM11AP58511 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM11AP58511 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM11AP58511 DUSP8P3-201ENST00000399571 1760 ntBASIC21■□□□□ 0.95
SMIM11AP58511 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM11AP58511 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM11AP58511 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SMIM11AP58511 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM11AP58511 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM11AP58511 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM11AP58511 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM11AP58511 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SMIM11AP58511 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM11AP58511 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SMIM11AP58511 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM11AP58511 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM11AP58511 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM11AP58511 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM11AP58511 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM11AP58511 AL117328.2-201ENST00000624617 1940 ntBASIC20.98■□□□□ 0.95
SMIM11AP58511 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.98■□□□□ 0.95
SMIM11AP58511 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM11AP58511 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.98■□□□□ 0.95
SMIM11AP58511 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM11AP58511 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SMIM11AP58511 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SMIM11AP58511 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM11AP58511 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM11AP58511 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM11AP58511 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.97■□□□□ 0.95
SMIM11AP58511 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM11AP58511 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.97■□□□□ 0.95
SMIM11AP58511 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM11AP58511 MIR6765-201ENST00000614092 87 ntBASIC20.97■□□□□ 0.95
SMIM11AP58511 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms