Protein–RNA interactions for Protein: P27797

CALR, Calreticulin, humanhuman

Known RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALRP27797 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CALRP27797 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.72■■□□□ 1.07
CALRP27797 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CALRP27797 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CALRP27797 AC233723.2-201ENST00000623798 2106 ntBASIC21.71■■□□□ 1.07
CALRP27797 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CALRP27797 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CALRP27797 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.71■■□□□ 1.07
CALRP27797 CAHM-201ENST00000604200 896 ntBASIC21.71■■□□□ 1.07
CALRP27797 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.71■■□□□ 1.07
CALRP27797 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CALRP27797 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CALRP27797 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CALRP27797 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CALRP27797 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CALRP27797 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CALRP27797 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.7■■□□□ 1.06
CALRP27797 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CALRP27797 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CALRP27797 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.7■■□□□ 1.06
CALRP27797 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
CALRP27797 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CALRP27797 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CALRP27797 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CALRP27797 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CALRP27797 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALRP27797 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CALRP27797 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALRP27797 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALRP27797 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALRP27797 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALRP27797 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALRP27797 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CALRP27797 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CALRP27797 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CALRP27797 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CALRP27797 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CALRP27797 AL137060.1-201ENST00000618151 2648 ntBASIC21.68■■□□□ 1.06
CALRP27797 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CALRP27797 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.68■■□□□ 1.06
CALRP27797 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CALRP27797 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.68■■□□□ 1.06
CALRP27797 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CALRP27797 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CALRP27797 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALRP27797 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALRP27797 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALRP27797 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CALRP27797 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALRP27797 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.67■■□□□ 1.06
CALRP27797 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CALRP27797 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CALRP27797 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.66■■□□□ 1.06
CALRP27797 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CALRP27797 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.66■■□□□ 1.06
CALRP27797 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CALRP27797 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.65■■□□□ 1.06
CALRP27797 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CALRP27797 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CALRP27797 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CALRP27797 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.65■■□□□ 1.06
CALRP27797 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CALRP27797 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CALRP27797 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CALRP27797 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CALRP27797 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CALRP27797 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.64■■□□□ 1.05
CALRP27797 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.64■■□□□ 1.05
CALRP27797 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CALRP27797 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CALRP27797 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CALRP27797 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CALRP27797 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CALRP27797 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CALRP27797 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CALRP27797 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALRP27797 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CALRP27797 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.63■■□□□ 1.05
CALRP27797 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALRP27797 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CALRP27797 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.63■■□□□ 1.05
CALRP27797 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.63■■□□□ 1.05
CALRP27797 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.63■■□□□ 1.05
CALRP27797 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.63■■□□□ 1.05
CALRP27797 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CALRP27797 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.62■■□□□ 1.05
CALRP27797 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CALRP27797 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CALRP27797 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CALRP27797 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CALRP27797 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CALRP27797 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CALRP27797 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.62■■□□□ 1.05
CALRP27797 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CALRP27797 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.61■■□□□ 1.05
CALRP27797 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.61■■□□□ 1.05
CALRP27797 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CALRP27797 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CALRP27797 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.61■■□□□ 1.05
CALRP27797 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms