Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSF1P09603 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSF1P09603 TSPY13P-201ENST00000338964 914 ntBASIC19.66■□□□□ 0.74
CSF1P09603 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.66■□□□□ 0.74
CSF1P09603 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.66■□□□□ 0.74
CSF1P09603 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSF1P09603 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.66■□□□□ 0.74
CSF1P09603 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSF1P09603 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1P09603 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.65■□□□□ 0.74
CSF1P09603 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1P09603 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.65■□□□□ 0.74
CSF1P09603 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1P09603 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CSF1P09603 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CSF1P09603 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CSF1P09603 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1P09603 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.65■□□□□ 0.74
CSF1P09603 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1P09603 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1P09603 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1P09603 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1P09603 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CSF1P09603 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.74
CSF1P09603 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSF1P09603 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1P09603 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1P09603 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.64■□□□□ 0.73
CSF1P09603 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1P09603 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.64■□□□□ 0.73
CSF1P09603 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.64■□□□□ 0.73
CSF1P09603 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CSF1P09603 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CSF1P09603 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1P09603 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1P09603 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1P09603 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.63■□□□□ 0.73
CSF1P09603 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1P09603 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.63■□□□□ 0.73
CSF1P09603 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1P09603 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.63■□□□□ 0.73
CSF1P09603 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.63■□□□□ 0.73
CSF1P09603 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.63■□□□□ 0.73
CSF1P09603 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CSF1P09603 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSF1P09603 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSF1P09603 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSF1P09603 AC127496.7-201ENST00000625110 1798 ntBASIC19.62■□□□□ 0.73
CSF1P09603 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSF1P09603 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSF1P09603 ECEL1P2-201ENST00000461596 1295 ntBASIC19.62■□□□□ 0.73
CSF1P09603 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSF1P09603 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSF1P09603 LINC00526-201ENST00000581067 1875 ntBASIC19.62■□□□□ 0.73
CSF1P09603 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CSF1P09603 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSF1P09603 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSF1P09603 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.61■□□□□ 0.73
CSF1P09603 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CSF1P09603 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 AC092296.2-201ENST00000589470 999 ntBASIC19.61■□□□□ 0.73
CSF1P09603 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CSF1P09603 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSF1P09603 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSF1P09603 ANOS2P-203ENST00000472227 1816 ntBASIC19.6■□□□□ 0.73
CSF1P09603 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSF1P09603 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSF1P09603 KRT18P60-201ENST00000312876 1297 ntBASIC19.6■□□□□ 0.73
CSF1P09603 AC004987.1-201ENST00000428627 508 ntBASIC19.6■□□□□ 0.73
CSF1P09603 ATP5G2P3-201ENST00000429083 425 ntBASIC19.6■□□□□ 0.73
CSF1P09603 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.6■□□□□ 0.73
CSF1P09603 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSF1P09603 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSF1P09603 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSF1P09603 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CSF1P09603 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSF1P09603 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSF1P09603 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.59■□□□□ 0.73
CSF1P09603 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSF1P09603 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CSF1P09603 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSF1P09603 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSF1P09603 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.59■□□□□ 0.73
CSF1P09603 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSF1P09603 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSF1P09603 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.59■□□□□ 0.73
CSF1P09603 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSF1P09603 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSF1P09603 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms