Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A2P08123 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
COL1A2P08123 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
COL1A2P08123 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
COL1A2P08123 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A2P08123 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A2P08123 UNC93B3-201ENST00000308076 687 ntBASIC25.34■■□□□ 1.65
COL1A2P08123 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A2P08123 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A2P08123 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.34■■□□□ 1.65
COL1A2P08123 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A2P08123 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A2P08123 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A2P08123 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A2P08123 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL1A2P08123 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.33■■□□□ 1.65
COL1A2P08123 DUX4L19-201ENST00000557448 1267 ntBASIC25.33■■□□□ 1.65
COL1A2P08123 AC005837.3-201ENST00000612163 286 ntBASIC25.33■■□□□ 1.65
COL1A2P08123 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL1A2P08123 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COL1A2P08123 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL1A2P08123 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL1A2P08123 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
COL1A2P08123 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
COL1A2P08123 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A2P08123 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A2P08123 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A2P08123 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A2P08123 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.32■■□□□ 1.64
COL1A2P08123 PBX2P1-201ENST00000493219 1291 ntBASIC25.32■■□□□ 1.64
COL1A2P08123 AL136162.1-201ENST00000607711 1078 ntBASIC25.32■■□□□ 1.64
COL1A2P08123 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A2P08123 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.32■■□□□ 1.64
COL1A2P08123 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A2P08123 AC009102.2-201ENST00000606772 1639 ntBASIC25.32■■□□□ 1.64
COL1A2P08123 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A2P08123 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.31■■□□□ 1.64
COL1A2P08123 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
COL1A2P08123 AC092171.4-201ENST00000609130 632 ntBASIC25.31■■□□□ 1.64
COL1A2P08123 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL1A2P08123 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL1A2P08123 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
COL1A2P08123 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL1A2P08123 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.31■■□□□ 1.64
COL1A2P08123 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL1A2P08123 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.31■■□□□ 1.64
COL1A2P08123 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.31■■□□□ 1.64
COL1A2P08123 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.31■■□□□ 1.64
COL1A2P08123 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL1A2P08123 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL1A2P08123 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL1A2P08123 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL1A2P08123 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
COL1A2P08123 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.3■■□□□ 1.64
COL1A2P08123 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.3■■□□□ 1.64
COL1A2P08123 AC135279.3-201ENST00000610945 1311 ntBASIC25.3■■□□□ 1.64
COL1A2P08123 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
COL1A2P08123 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.3■■□□□ 1.64
COL1A2P08123 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL1A2P08123 AC142381.3-201ENST00000568208 1670 ntBASIC25.29■■□□□ 1.64
COL1A2P08123 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL1A2P08123 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.29■■□□□ 1.64
COL1A2P08123 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL1A2P08123 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
COL1A2P08123 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL1A2P08123 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A2P08123 C17orf82-201ENST00000623772 1530 ntBASIC25.27■■□□□ 1.64
COL1A2P08123 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A2P08123 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.27■■□□□ 1.64
COL1A2P08123 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.27■■□□□ 1.64
COL1A2P08123 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.27■■□□□ 1.64
COL1A2P08123 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A2P08123 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A2P08123 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A2P08123 ALDH1A3-203ENST00000557963 1670 ntBASIC25.27■■□□□ 1.64
COL1A2P08123 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
COL1A2P08123 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.27■■□□□ 1.64
COL1A2P08123 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.27■■□□□ 1.64
COL1A2P08123 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A2P08123 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A2P08123 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL1A2P08123 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL1A2P08123 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.26■■□□□ 1.63
COL1A2P08123 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL1A2P08123 AC024257.2-201ENST00000549699 147 ntBASIC25.26■■□□□ 1.63
COL1A2P08123 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL1A2P08123 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.25■■□□□ 1.63
COL1A2P08123 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.25■■□□□ 1.63
COL1A2P08123 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.25■■□□□ 1.63
COL1A2P08123 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.25■■□□□ 1.63
COL1A2P08123 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A2P08123 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
COL1A2P08123 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.24■■□□□ 1.63
COL1A2P08123 AL031432.3-201ENST00000607698 485 ntBASIC25.24■■□□□ 1.63
COL1A2P08123 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A2P08123 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A2P08123 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A2P08123 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
COL1A2P08123 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
COL1A2P08123 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms