Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNRNP200O75643 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
SNRNP200O75643 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
SNRNP200O75643 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.05■■□□□ 1.12
SNRNP200O75643 AL022069.1-201ENST00000568025 1636 ntBASIC22.05■■□□□ 1.12
SNRNP200O75643 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNRNP200O75643 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
SNRNP200O75643 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.05■■□□□ 1.12
SNRNP200O75643 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SNRNP200O75643 ABCB10P4-201ENST00000566803 2184 ntBASIC22.05■■□□□ 1.12
SNRNP200O75643 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNRNP200O75643 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SNRNP200O75643 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.04■■□□□ 1.12
SNRNP200O75643 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.04■■□□□ 1.12
SNRNP200O75643 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SNRNP200O75643 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNRNP200O75643 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNRNP200O75643 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNRNP200O75643 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.03■■□□□ 1.12
SNRNP200O75643 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SNRNP200O75643 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SNRNP200O75643 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNRNP200O75643 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.03■■□□□ 1.12
SNRNP200O75643 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.03■■□□□ 1.12
SNRNP200O75643 AL139125.2-201ENST00000623134 1869 ntBASIC22.03■■□□□ 1.12
SNRNP200O75643 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNRNP200O75643 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNRNP200O75643 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.03■■□□□ 1.12
SNRNP200O75643 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.03■■□□□ 1.12
SNRNP200O75643 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.03■■□□□ 1.12
SNRNP200O75643 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.03■■□□□ 1.12
SNRNP200O75643 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNRNP200O75643 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SNRNP200O75643 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SNRNP200O75643 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SNRNP200O75643 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SNRNP200O75643 AC004812.2-201ENST00000611079 2094 ntBASIC22.01■■□□□ 1.11
SNRNP200O75643 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SNRNP200O75643 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SNRNP200O75643 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SNRNP200O75643 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SNRNP200O75643 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22■■□□□ 1.11
SNRNP200O75643 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22■■□□□ 1.11
SNRNP200O75643 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22■■□□□ 1.11
SNRNP200O75643 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22■■□□□ 1.11
SNRNP200O75643 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22■■□□□ 1.11
SNRNP200O75643 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SNRNP200O75643 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.99■■□□□ 1.11
SNRNP200O75643 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
SNRNP200O75643 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SNRNP200O75643 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNRNP200O75643 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.99■■□□□ 1.11
SNRNP200O75643 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.99■■□□□ 1.11
SNRNP200O75643 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNRNP200O75643 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNRNP200O75643 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNRNP200O75643 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SNRNP200O75643 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SNRNP200O75643 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNRNP200O75643 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.98■■□□□ 1.11
SNRNP200O75643 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SNRNP200O75643 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SNRNP200O75643 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SNRNP200O75643 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNRNP200O75643 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SNRNP200O75643 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNRNP200O75643 AC005703.6-201ENST00000623265 1329 ntBASIC21.97■■□□□ 1.11
SNRNP200O75643 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNRNP200O75643 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.97■■□□□ 1.11
SNRNP200O75643 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.97■■□□□ 1.11
SNRNP200O75643 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SNRNP200O75643 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.97■■□□□ 1.11
SNRNP200O75643 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.97■■□□□ 1.11
SNRNP200O75643 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNRNP200O75643 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNRNP200O75643 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SNRNP200O75643 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNRNP200O75643 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNRNP200O75643 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNRNP200O75643 MIR6722-201ENST00000617286 78 ntBASIC21.97■■□□□ 1.11
SNRNP200O75643 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SNRNP200O75643 AC141586.4-201ENST00000624558 1573 ntBASIC21.96■■□□□ 1.11
SNRNP200O75643 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SNRNP200O75643 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNRNP200O75643 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.96■■□□□ 1.11
SNRNP200O75643 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNRNP200O75643 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SNRNP200O75643 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.96■■□□□ 1.11
SNRNP200O75643 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNRNP200O75643 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SNRNP200O75643 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.95■■□□□ 1.11
SNRNP200O75643 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SNRNP200O75643 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SNRNP200O75643 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNRNP200O75643 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNRNP200O75643 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNRNP200O75643 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNRNP200O75643 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.95■■□□□ 1.1
SNRNP200O75643 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
SNRNP200O75643 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms