Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D3DA0A087WVF3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D3DA0A087WVF3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D3DA0A087WVF3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D3DA0A087WVF3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.87■■□□□ 1.25
TBC1D3DA0A087WVF3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D3DA0A087WVF3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D3DA0A087WVF3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
TBC1D3DA0A087WVF3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.87■■□□□ 1.25
TBC1D3DA0A087WVF3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TBC1D3DA0A087WVF3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TBC1D3DA0A087WVF3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TBC1D3DA0A087WVF3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.86■■□□□ 1.25
TBC1D3DA0A087WVF3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TBC1D3DA0A087WVF3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D3DA0A087WVF3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.85■■□□□ 1.25
TBC1D3DA0A087WVF3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
TBC1D3DA0A087WVF3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D3DA0A087WVF3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D3DA0A087WVF3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D3DA0A087WVF3 AC024257.2-201ENST00000549699 147 ntBASIC22.85■■□□□ 1.25
TBC1D3DA0A087WVF3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.85■■□□□ 1.25
TBC1D3DA0A087WVF3 DUX4L19-201ENST00000557448 1267 ntBASIC22.85■■□□□ 1.25
TBC1D3DA0A087WVF3 AC142381.2-201ENST00000566120 298 ntBASIC22.85■■□□□ 1.25
TBC1D3DA0A087WVF3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D3DA0A087WVF3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.84■■□□□ 1.25
TBC1D3DA0A087WVF3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.84■■□□□ 1.25
TBC1D3DA0A087WVF3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TBC1D3DA0A087WVF3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.84■■□□□ 1.25
TBC1D3DA0A087WVF3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.83■■□□□ 1.25
TBC1D3DA0A087WVF3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
TBC1D3DA0A087WVF3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.83■■□□□ 1.25
TBC1D3DA0A087WVF3 AC092171.4-201ENST00000609130 632 ntBASIC22.83■■□□□ 1.25
TBC1D3DA0A087WVF3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.83■■□□□ 1.25
TBC1D3DA0A087WVF3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TBC1D3DA0A087WVF3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TBC1D3DA0A087WVF3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.83■■□□□ 1.25
TBC1D3DA0A087WVF3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D3DA0A087WVF3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.82■■□□□ 1.24
TBC1D3DA0A087WVF3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D3DA0A087WVF3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.82■■□□□ 1.24
TBC1D3DA0A087WVF3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D3DA0A087WVF3 SYT6-210ENST00000641643 1587 ntBASIC22.81■■□□□ 1.24
TBC1D3DA0A087WVF3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.81■■□□□ 1.24
TBC1D3DA0A087WVF3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TBC1D3DA0A087WVF3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
TBC1D3DA0A087WVF3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
TBC1D3DA0A087WVF3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.81■■□□□ 1.24
TBC1D3DA0A087WVF3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TBC1D3DA0A087WVF3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TBC1D3DA0A087WVF3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TBC1D3DA0A087WVF3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
TBC1D3DA0A087WVF3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 AC009102.2-201ENST00000606772 1639 ntBASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 AC022211.4-201ENST00000625094 2161 ntBASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D3DA0A087WVF3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D3DA0A087WVF3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D3DA0A087WVF3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D3DA0A087WVF3 AC099791.2-201ENST00000605725 427 ntBASIC22.79■■□□□ 1.24
TBC1D3DA0A087WVF3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
TBC1D3DA0A087WVF3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
TBC1D3DA0A087WVF3 EDA-201ENST00000338901 1233 ntBASIC22.78■■□□□ 1.24
TBC1D3DA0A087WVF3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.78■■□□□ 1.24
TBC1D3DA0A087WVF3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.78■■□□□ 1.24
TBC1D3DA0A087WVF3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
TBC1D3DA0A087WVF3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
TBC1D3DA0A087WVF3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.78■■□□□ 1.24
TBC1D3DA0A087WVF3 AL161729.1-201ENST00000604104 1402 ntBASIC22.78■■□□□ 1.24
TBC1D3DA0A087WVF3 AL355001.2-201ENST00000620617 1191 ntBASIC22.78■■□□□ 1.24
TBC1D3DA0A087WVF3 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.78■■□□□ 1.24
TBC1D3DA0A087WVF3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TBC1D3DA0A087WVF3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TBC1D3DA0A087WVF3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.77■■□□□ 1.24
TBC1D3DA0A087WVF3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TBC1D3DA0A087WVF3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TBC1D3DA0A087WVF3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.77■■□□□ 1.24
TBC1D3DA0A087WVF3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TBC1D3DA0A087WVF3 SUDS3P1-201ENST00000505831 966 ntBASIC22.77■■□□□ 1.24
TBC1D3DA0A087WVF3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TBC1D3DA0A087WVF3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
TBC1D3DA0A087WVF3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
TBC1D3DA0A087WVF3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
TBC1D3DA0A087WVF3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TBC1D3DA0A087WVF3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TBC1D3DA0A087WVF3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.76■■□□□ 1.23
TBC1D3DA0A087WVF3 AL031432.3-201ENST00000607698 485 ntBASIC22.76■■□□□ 1.23
TBC1D3DA0A087WVF3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.76■■□□□ 1.23
TBC1D3DA0A087WVF3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
TBC1D3DA0A087WVF3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
TBC1D3DA0A087WVF3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms