Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RPUSD1Q9UJJ7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPUSD1Q9UJJ7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.08■□□□□ 0.65
RPUSD1Q9UJJ7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
RPUSD1Q9UJJ7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPUSD1Q9UJJ7 AL356441.2-201ENST00000443009 864 ntBASIC19.08■□□□□ 0.64
RPUSD1Q9UJJ7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.08■□□□□ 0.64
RPUSD1Q9UJJ7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.08■□□□□ 0.64
RPUSD1Q9UJJ7 SNX5-217ENST00000606557 1087 ntBASIC19.08■□□□□ 0.64
RPUSD1Q9UJJ7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RPUSD1Q9UJJ7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RPUSD1Q9UJJ7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPUSD1Q9UJJ7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 KRT16P3-201ENST00000439127 1283 ntBASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 MTDHP2-201ENST00000601468 714 ntBASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.07■□□□□ 0.64
RPUSD1Q9UJJ7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 AC010997.5-201ENST00000609182 354 ntBASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.06■□□□□ 0.64
RPUSD1Q9UJJ7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPUSD1Q9UJJ7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.05■□□□□ 0.64
RPUSD1Q9UJJ7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPUSD1Q9UJJ7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.05■□□□□ 0.64
RPUSD1Q9UJJ7 AL022069.1-201ENST00000568025 1636 ntBASIC19.05■□□□□ 0.64
RPUSD1Q9UJJ7 AC004448.1-201ENST00000458332 883 ntBASIC19.05■□□□□ 0.64
RPUSD1Q9UJJ7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPUSD1Q9UJJ7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPUSD1Q9UJJ7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPUSD1Q9UJJ7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPUSD1Q9UJJ7 AC131274.2-201ENST00000580697 1507 ntBASIC19.05■□□□□ 0.64
RPUSD1Q9UJJ7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPUSD1Q9UJJ7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPUSD1Q9UJJ7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPUSD1Q9UJJ7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPUSD1Q9UJJ7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPUSD1Q9UJJ7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPUSD1Q9UJJ7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
RPUSD1Q9UJJ7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RPUSD1Q9UJJ7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.04■□□□□ 0.64
RPUSD1Q9UJJ7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RPUSD1Q9UJJ7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPUSD1Q9UJJ7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RPUSD1Q9UJJ7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.03■□□□□ 0.64
RPUSD1Q9UJJ7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.03■□□□□ 0.64
RPUSD1Q9UJJ7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RPUSD1Q9UJJ7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPUSD1Q9UJJ7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPUSD1Q9UJJ7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPUSD1Q9UJJ7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.02■□□□□ 0.64
RPUSD1Q9UJJ7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.02■□□□□ 0.64
RPUSD1Q9UJJ7 MIR6722-201ENST00000617286 78 ntBASIC19.02■□□□□ 0.64
RPUSD1Q9UJJ7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.02■□□□□ 0.64
RPUSD1Q9UJJ7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPUSD1Q9UJJ7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RPUSD1Q9UJJ7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.02■□□□□ 0.63
RPUSD1Q9UJJ7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPUSD1Q9UJJ7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RPUSD1Q9UJJ7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.01■□□□□ 0.63
RPUSD1Q9UJJ7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPUSD1Q9UJJ7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms