Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTSFQ9UBX1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTSFQ9UBX1 HLA-L-211ENST00000482052 1765 ntBASIC21.7■■□□□ 1.06
CTSFQ9UBX1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CTSFQ9UBX1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.7■■□□□ 1.06
CTSFQ9UBX1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.7■■□□□ 1.06
CTSFQ9UBX1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTSFQ9UBX1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.7■■□□□ 1.06
CTSFQ9UBX1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTSFQ9UBX1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTSFQ9UBX1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSFQ9UBX1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.69■■□□□ 1.06
CTSFQ9UBX1 AL136116.3-201ENST00000402907 1138 ntBASIC21.69■■□□□ 1.06
CTSFQ9UBX1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.69■■□□□ 1.06
CTSFQ9UBX1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTSFQ9UBX1 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.69■■□□□ 1.06
CTSFQ9UBX1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSFQ9UBX1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSFQ9UBX1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTSFQ9UBX1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSFQ9UBX1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CTSFQ9UBX1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CTSFQ9UBX1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 AL512631.2-201ENST00000604634 923 ntBASIC21.68■■□□□ 1.06
CTSFQ9UBX1 MIR4466-201ENST00000606121 54 ntBASIC21.68■■□□□ 1.06
CTSFQ9UBX1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.68■■□□□ 1.06
CTSFQ9UBX1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 AL022069.1-201ENST00000568025 1636 ntBASIC21.67■■□□□ 1.06
CTSFQ9UBX1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSFQ9UBX1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CTSFQ9UBX1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
CTSFQ9UBX1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSFQ9UBX1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.65■■□□□ 1.06
CTSFQ9UBX1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTSFQ9UBX1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.65■■□□□ 1.06
CTSFQ9UBX1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.65■■□□□ 1.06
CTSFQ9UBX1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTSFQ9UBX1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTSFQ9UBX1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.06
CTSFQ9UBX1 AC020928.2-201ENST00000588717 2197 ntBASIC21.64■■□□□ 1.06
CTSFQ9UBX1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSFQ9UBX1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSFQ9UBX1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSFQ9UBX1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSFQ9UBX1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTSFQ9UBX1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTSFQ9UBX1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSFQ9UBX1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSFQ9UBX1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CTSFQ9UBX1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSFQ9UBX1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTSFQ9UBX1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTSFQ9UBX1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSFQ9UBX1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSFQ9UBX1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSFQ9UBX1 AC138932.3-201ENST00000567634 1902 ntBASIC21.63■■□□□ 1.05
CTSFQ9UBX1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.62■■□□□ 1.05
CTSFQ9UBX1 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.62■■□□□ 1.05
CTSFQ9UBX1 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.62■■□□□ 1.05
CTSFQ9UBX1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTSFQ9UBX1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSFQ9UBX1 AC005703.6-201ENST00000623265 1329 ntBASIC21.62■■□□□ 1.05
CTSFQ9UBX1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.62■■□□□ 1.05
CTSFQ9UBX1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CTSFQ9UBX1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.62■■□□□ 1.05
CTSFQ9UBX1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTSFQ9UBX1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.62■■□□□ 1.05
CTSFQ9UBX1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms