Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC6A18Q96N87 AC131274.2-201ENST00000580697 1507 ntBASIC22.87■■□□□ 1.25
SLC6A18Q96N87 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SLC6A18Q96N87 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 AC024257.2-201ENST00000549699 147 ntBASIC22.86■■□□□ 1.25
SLC6A18Q96N87 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
SLC6A18Q96N87 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 SUDS3P1-201ENST00000505831 966 ntBASIC22.82■■□□□ 1.24
SLC6A18Q96N87 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 AC091060.1-201ENST00000623524 1766 ntBASIC22.81■■□□□ 1.24
SLC6A18Q96N87 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 DUSP8P4-201ENST00000399538 1761 ntBASIC22.8■■□□□ 1.24
SLC6A18Q96N87 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 EDA-201ENST00000338901 1233 ntBASIC22.79■■□□□ 1.24
SLC6A18Q96N87 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 MIR6089-201ENST00000616698 64 ntBASIC22.78■■□□□ 1.24
SLC6A18Q96N87 AL355001.2-201ENST00000620617 1191 ntBASIC22.78■■□□□ 1.24
SLC6A18Q96N87 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.77■■□□□ 1.24
SLC6A18Q96N87 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
SLC6A18Q96N87 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SLC6A18Q96N87 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SLC6A18Q96N87 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms