Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.233e-7■■■□□ 16.8
FUBP3Q96I24 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.13e-7■■■□□ 16.8
FUBP3Q96I24 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.083e-7■■■□□ 16.8
FUBP3Q96I24 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.943e-7■■■□□ 16.8
FUBP3Q96I24 SSFA2-206ENST00000440623 5420 ntTSL 27.27□□□□□ -1.253e-7■■■□□ 16.8
FUBP3Q96I24 SSFA2-204ENST00000416081 5067 ntTSL 1 (best)6.94□□□□□ -1.33e-7■■■□□ 16.8
FUBP3Q96I24 SSFA2-213ENST00000491720 6473 ntTSL 25.97□□□□□ -1.453e-7■■■□□ 16.8
FUBP3Q96I24 HLF-202ENST00000430986 1385 ntTSL 2 BASIC13.79□□□□□ -0.21e-10■■■□□ 16.8
FUBP3Q96I24 HLF-204ENST00000572002 1251 ntTSL 313.52□□□□□ -0.251e-10■■■□□ 16.8
FUBP3Q96I24 HLF-203ENST00000570962 1310 ntTSL 212.12□□□□□ -0.471e-10■■■□□ 16.8
FUBP3Q96I24 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.82■■□□□ 1.082e-6■■■□□ 16.8
FUBP3Q96I24 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.786e-7■■■□□ 16.7
FUBP3Q96I24 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.169e-7■■■□□ 16.7
FUBP3Q96I24 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.219e-7■■■□□ 16.7
FUBP3Q96I24 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.85□□□□□ -1.799e-7■■■□□ 16.7
FUBP3Q96I24 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.946e-7■■■□□ 16.7
FUBP3Q96I24 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.83e-6■■■□□ 16.7
FUBP3Q96I24 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.411e-6■■■□□ 16.7
FUBP3Q96I24 ARHGAP29-205ENST00000552844 3439 ntTSL 1 (best)2.2□□□□□ -2.061e-6■■■□□ 16.7
FUBP3Q96I24 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.832e-7■■■□□ 16.7
FUBP3Q96I24 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.012e-18■■■□□ 16.7
FUBP3Q96I24 TERF2IP-202ENST00000564671 1266 ntTSL 211.74□□□□□ -0.532e-18■■■□□ 16.7
FUBP3Q96I24 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.471e-7■■■□□ 16.7
FUBP3Q96I24 SNRNP48-202ENST00000496946 2610 ntTSL 23.22□□□□□ -1.891e-7■■■□□ 16.7
FUBP3Q96I24 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.7□□□□□ -1.52e-37■■■□□ 16.6
FUBP3Q96I24 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.696e-11■■■□□ 16.6
FUBP3Q96I24 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.786e-11■■■□□ 16.6
FUBP3Q96I24 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.271e-18■■■□□ 16.6
FUBP3Q96I24 TUBA1C-209ENST00000552448 1800 ntTSL 310.97□□□□□ -0.651e-18■■■□□ 16.6
FUBP3Q96I24 TUBA1C-202ENST00000541364 1695 ntTSL 2 BASIC10.09□□□□□ -0.791e-18■■■□□ 16.6
FUBP3Q96I24 TUBA1C-210ENST00000639419 1075 ntTSL 5 BASIC9.98□□□□□ -0.811e-18■■■□□ 16.6
FUBP3Q96I24 SFT2D1-206ENST00000494682 359 ntTSL 35.31□□□□□ -1.568e-11■■■□□ 16.6
FUBP3Q96I24 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.231e-7■■■□□ 16.6
FUBP3Q96I24 ZCCHC2-202ENST00000585873 5652 ntTSL 1 (best)19.12■□□□□ 0.651e-7■■■□□ 16.6
FUBP3Q96I24 ZCCHC2-208ENST00000591145 673 ntTSL 39.6□□□□□ -0.871e-7■■■□□ 16.6
FUBP3Q96I24 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.091e-7■■■□□ 16.6
FUBP3Q96I24 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.11■□□□□ 0.171e-16■■■□□ 16.6
FUBP3Q96I24 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.031e-16■■■□□ 16.6
FUBP3Q96I24 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.221e-16■■■□□ 16.6
FUBP3Q96I24 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.082e-9■■■□□ 16.6
FUBP3Q96I24 TMEM2-210ENST00000542935 5372 ntTSL 1 (best)6.96□□□□□ -1.292e-9■■■□□ 16.6
FUBP3Q96I24 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.5□□□□□ -0.091e-12■■■□□ 16.5
FUBP3Q96I24 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC8.34□□□□□ -1.074e-13■■■□□ 16.5
FUBP3Q96I24 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.31e-9■■■□□ 16.5
FUBP3Q96I24 PWAR5-201ENST00000624480 3180 ntBASIC8.67□□□□□ -1.025e-7■■■□□ 16.4
FUBP3Q96I24 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.126e-11■■■□□ 16.4
FUBP3Q96I24 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.66■□□□□ 0.585e-9■■■□□ 16.4
FUBP3Q96I24 ARL6IP6-205ENST00000495469 1308 ntTSL 222.41■■□□□ 1.183e-6■■■□□ 16.4
FUBP3Q96I24 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.383e-6■■■□□ 16.4
FUBP3Q96I24 ARL6IP6-204ENST00000463690 1402 ntTSL 25.23□□□□□ -1.573e-6■■■□□ 16.4
FUBP3Q96I24 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.22e-9■■■□□ 16.4
FUBP3Q96I24 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.523e-9■■■□□ 16.3
FUBP3Q96I24 AC005261.2-201ENST00000593427 4258 ntBASIC6.94□□□□□ -1.38e-7■■■□□ 16.3
FUBP3Q96I24 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.2□□□□□ -1.16e-7■■■□□ 16.3
FUBP3Q96I24 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.266e-7■■■□□ 16.3
FUBP3Q96I24 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.143e-7■■■□□ 16.3
FUBP3Q96I24 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.19□□□□□ -1.422e-7■■■□□ 16.3
FUBP3Q96I24 PREPL-210ENST00000425263 5657 ntTSL 1 (best)4.53□□□□□ -1.682e-7■■■□□ 16.3
FUBP3Q96I24 PREPL-211ENST00000426481 6273 ntTSL 1 (best)4.29□□□□□ -1.722e-7■■■□□ 16.3
FUBP3Q96I24 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.23□□□□□ -1.732e-7■■■□□ 16.3
FUBP3Q96I24 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.742e-7■■■□□ 16.3
FUBP3Q96I24 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.86□□□□□ -1.792e-7■■■□□ 16.3
FUBP3Q96I24 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.813e-11■■■□□ 16.3
FUBP3Q96I24 PHF3-207ENST00000505138 612 ntTSL 35.66□□□□□ -1.53e-11■■■□□ 16.3
FUBP3Q96I24 PHF3-210ENST00000509876 7124 ntTSL 1 (best)5.31□□□□□ -1.563e-11■■■□□ 16.3
FUBP3Q96I24 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.943e-11■■■□□ 16.3
FUBP3Q96I24 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.144e-12■■■□□ 16.2
FUBP3Q96I24 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.041e-6■■■□□ 16.2
FUBP3Q96I24 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.271e-10■■■□□ 16.2
FUBP3Q96I24 HMGB2-205ENST00000511316 1841 ntTSL 212.9□□□□□ -0.341e-10■■■□□ 16.2
FUBP3Q96I24 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.351e-10■■■□□ 16.2
FUBP3Q96I24 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.131e-10■■■□□ 16.2
FUBP3Q96I24 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.94□□□□□ -1.461e-8■■■□□ 16.2
FUBP3Q96I24 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.531e-8■■■□□ 16.2
FUBP3Q96I24 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.81■□□□□ 0.284e-13■■■□□ 16.2
FUBP3Q96I24 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.22e-11■■■□□ 16.2
FUBP3Q96I24 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.231e-9■■■□□ 16.2
FUBP3Q96I24 PRKAR1A-217ENST00000589228 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.51e-9■■■□□ 16.2
FUBP3Q96I24 PRKAR1A-201ENST00000358598 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.641e-9■■■□□ 16.2
FUBP3Q96I24 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC9.09□□□□□ -0.951e-9■■■□□ 16.2
FUBP3Q96I24 PRKAR1A-202ENST00000392710 3551 ntTSL 27.39□□□□□ -1.231e-9■■■□□ 16.2
FUBP3Q96I24 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.271e-9■■■□□ 16.2
FUBP3Q96I24 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.673e-24■■■□□ 16.2
FUBP3Q96I24 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.432e-13■■■□□ 16.2
FUBP3Q96I24 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.2■□□□□ 0.025e-6■■■□□ 16.1
FUBP3Q96I24 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.395e-6■■■□□ 16.1
FUBP3Q96I24 KHDRBS1-203ENST00000484270 1989 ntTSL 520.01■□□□□ 0.794e-21■■■□□ 16.1
FUBP3Q96I24 KHDRBS1-201ENST00000307714 2738 ntTSL 1 (best)19.16■□□□□ 0.664e-21■■■□□ 16.1
FUBP3Q96I24 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.064e-21■■■□□ 16.1
FUBP3Q96I24 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.232e-7■■■□□ 16.1
FUBP3Q96I24 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.882e-7■■■□□ 16.1
FUBP3Q96I24 LSM6-207ENST00000515311 545 ntTSL 422.29■■□□□ 1.162e-7■■■□□ 16.1
FUBP3Q96I24 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.49■□□□□ 0.232e-10■■■□□ 16.1
FUBP3Q96I24 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.222e-10■■■□□ 16.1
FUBP3Q96I24 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.182e-7■■■□□ 16.1
FUBP3Q96I24 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.182e-7■■■□□ 16.1
FUBP3Q96I24 LSM6-204ENST00000504181 549 ntTSL 213.35□□□□□ -0.272e-7■■■□□ 16.1
FUBP3Q96I24 CGGBP1-203ENST00000462901 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.442e-7■■■□□ 16.1
FUBP3Q96I24 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.03□□□□□ -1.122e-10■■■□□ 16.1
FUBP3Q96I24 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.332e-7■■■□□ 16.1
Retrieved 100 of 4,568 protein–RNA pairs in 330 ms