RNA–Protein interactions for RNA: ENST00000554230.5

GNPNAT1-203, Transcript of glucosamine-phosphate N-acetyltransferase 1, humanhuman

TSL 5 BASIC

Gene GNPNAT1, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPNAT1-203ENST00000554230 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
GNPNAT1-203ENST00000554230 CCDC180Q9P1Z9 1646 aa28.77■■■□□ 2.2
GNPNAT1-203ENST00000554230 ZCCHC6Q5VYS8 1495 aaKnown RBP27.77■■■□□ 2.04
GNPNAT1-203ENST00000554230 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
GNPNAT1-203ENST00000554230 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
GNPNAT1-203ENST00000554230 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
GNPNAT1-203ENST00000554230 SHROOM4Q9ULL8 1493 aa26.92■■□□□ 1.9
GNPNAT1-203ENST00000554230 ABCC9O60706 1549 aa26.89■■□□□ 1.89
GNPNAT1-203ENST00000554230 NACADO15069 1562 aa26.67■■□□□ 1.86
GNPNAT1-203ENST00000554230 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
GNPNAT1-203ENST00000554230 RB1CC1Q8TDY2 1594 aa26.4■■□□□ 1.82
GNPNAT1-203ENST00000554230 UNC13AQ9UPW8 1703 aa26.01■■□□□ 1.75
GNPNAT1-203ENST00000554230 SUPT5HO00267 1087 aaKnown RBP25.95■■□□□ 1.74
GNPNAT1-203ENST00000554230 BICRAQ9NZM4 1560 aa25.64■■□□□ 1.69
GNPNAT1-203ENST00000554230 RSF1Q96T23 1441 aaPredicted RBP25.62■■□□□ 1.69
GNPNAT1-203ENST00000554230 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
GNPNAT1-203ENST00000554230 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
GNPNAT1-203ENST00000554230 BAZ1AQ9NRL2 1556 aaPredicted RBP25.46■■□□□ 1.67
GNPNAT1-203ENST00000554230 SMARCA4P51532 1647 aa25.35■■□□□ 1.65
GNPNAT1-203ENST00000554230 PABPN1Q86U42 306 aaKnown RBP eCLIP25.32■■□□□ 1.64
GNPNAT1-203ENST00000554230 WIZO95785 1651 aa25.32■■□□□ 1.64
GNPNAT1-203ENST00000554230 PEG3Q9GZU2 1588 aa25.06■■□□□ 1.6
GNPNAT1-203ENST00000554230 TOP2AP11388 1531 aaKnown RBP25.05■■□□□ 1.6
GNPNAT1-203ENST00000554230 CHIC1Q5VXU3 224 aa24.98■■□□□ 1.59
GNPNAT1-203ENST00000554230 SMARCA2P51531 1590 aa24.85■■□□□ 1.57
GNPNAT1-203ENST00000554230 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.57
GNPNAT1-203ENST00000554230 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
GNPNAT1-203ENST00000554230 CCDC88BA6NC98 1476 aa24.75■■□□□ 1.55
GNPNAT1-203ENST00000554230 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.54
GNPNAT1-203ENST00000554230 HMGXB3Q12766 1538 aa24.63■■□□□ 1.53
GNPNAT1-203ENST00000554230 NCAPD3P42695 1498 aa24.58■■□□□ 1.53
GNPNAT1-203ENST00000554230 CC2D2AQ9P2K1 1620 aa24.41■■□□□ 1.5
GNPNAT1-203ENST00000554230 TRIM41Q8WV44 630 aa24.39■■□□□ 1.5
GNPNAT1-203ENST00000554230 ABCC8Q09428 1581 aa24.32■■□□□ 1.48
GNPNAT1-203ENST00000554230 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
GNPNAT1-203ENST00000554230 CFTRP13569 1480 aa24.1■■□□□ 1.45
GNPNAT1-203ENST00000554230 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
GNPNAT1-203ENST00000554230 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
GNPNAT1-203ENST00000554230 LOC105371045A0A1W2PR82 267 aa23.99■■□□□ 1.43
GNPNAT1-203ENST00000554230 BIVM-ERCC5R4GMW8 1640 aa23.97■■□□□ 1.43
GNPNAT1-203ENST00000554230 TOP2BQ02880 1626 aa23.96■■□□□ 1.43
GNPNAT1-203ENST00000554230 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
GNPNAT1-203ENST00000554230 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
GNPNAT1-203ENST00000554230 EEA1Q15075 1411 aa23.87■■□□□ 1.41
GNPNAT1-203ENST00000554230 SOGA1O94964 1423 aa23.85■■□□□ 1.41
GNPNAT1-203ENST00000554230 CUX1P39880 1505 aa23.82■■□□□ 1.4
GNPNAT1-203ENST00000554230 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
GNPNAT1-203ENST00000554230 LAMC3Q9Y6N6 1575 aa23.76■■□□□ 1.39
GNPNAT1-203ENST00000554230 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.38
GNPNAT1-203ENST00000554230 NESP48681 1621 aa23.69■■□□□ 1.38
GNPNAT1-203ENST00000554230 CSRNP3Q8WYN3 585 aa23.64■■□□□ 1.37
GNPNAT1-203ENST00000554230 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
GNPNAT1-203ENST00000554230 KIF21BO75037 1637 aa23.62■■□□□ 1.37
GNPNAT1-203ENST00000554230 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
GNPNAT1-203ENST00000554230 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
GNPNAT1-203ENST00000554230 GOLGA3Q08378 1498 aa23.55■■□□□ 1.36
GNPNAT1-203ENST00000554230 CEP164Q9UPV0 1460 aa23.54■■□□□ 1.36
GNPNAT1-203ENST00000554230 FGD5Q6ZNL6 1462 aa23.51■■□□□ 1.35
GNPNAT1-203ENST00000554230 KIF21AQ7Z4S6 1674 aa23.51■■□□□ 1.35
GNPNAT1-203ENST00000554230 PDS5BQ9NTI5 1447 aa23.49■■□□□ 1.35
GNPNAT1-203ENST00000554230 TNIKQ9UKE5 1360 aa23.49■■□□□ 1.35
GNPNAT1-203ENST00000554230 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
GNPNAT1-203ENST00000554230 KIF27Q86VH2 1401 aa23.46■■□□□ 1.35
GNPNAT1-203ENST00000554230 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
GNPNAT1-203ENST00000554230 ERICH3Q5RHP9 1530 aa23.41■■□□□ 1.34
GNPNAT1-203ENST00000554230 PRXQ9BXM0 1461 aa23.39■■□□□ 1.34
GNPNAT1-203ENST00000554230 POLA1P09884 1462 aaPredicted RBP23.38■■□□□ 1.33
GNPNAT1-203ENST00000554230 CEP162Q5TB80 1403 aa23.38■■□□□ 1.33
GNPNAT1-203ENST00000554230 RAPGEF2Q9Y4G8 1499 aa23.38■■□□□ 1.33
GNPNAT1-203ENST00000554230 CUX2O14529 1486 aa23.36■■□□□ 1.33
GNPNAT1-203ENST00000554230 WDR97A6NE52 1622 aa23.34■■□□□ 1.33
GNPNAT1-203ENST00000554230 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.32
GNPNAT1-203ENST00000554230 UBTFP17480 764 aaKnown RBP23.31■■□□□ 1.32
GNPNAT1-203ENST00000554230 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
GNPNAT1-203ENST00000554230 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
GNPNAT1-203ENST00000554230 IGF1RP08069 1367 aa23.22■■□□□ 1.31
GNPNAT1-203ENST00000554230 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
GNPNAT1-203ENST00000554230 TARBP1Q13395 1621 aaKnown RBP23.17■■□□□ 1.3
GNPNAT1-203ENST00000554230 CUL7Q14999 1698 aa23.14■■□□□ 1.3
GNPNAT1-203ENST00000554230 CLIP1P30622 1438 aa23.14■■□□□ 1.3
GNPNAT1-203ENST00000554230 WDR62O43379 1518 aa23.14■■□□□ 1.29
GNPNAT1-203ENST00000554230 CARMIL1Q5VZK9 1371 aa23.1■■□□□ 1.29
GNPNAT1-203ENST00000554230 PCGF6Q9BYE7 350 aa23.08■■□□□ 1.28
GNPNAT1-203ENST00000554230 TRIM26Q12899 539 aaPredicted RBP23.06■■□□□ 1.28
GNPNAT1-203ENST00000554230 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
GNPNAT1-203ENST00000554230 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
GNPNAT1-203ENST00000554230 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
GNPNAT1-203ENST00000554230 PBRM1Q86U86 1689 aa23■■□□□ 1.27
GNPNAT1-203ENST00000554230 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
GNPNAT1-203ENST00000554230 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
GNPNAT1-203ENST00000554230 IFT140Q96RY7 1462 aa22.96■■□□□ 1.27
GNPNAT1-203ENST00000554230 CTTNBP2Q8WZ74 1663 aa22.96■■□□□ 1.27
GNPNAT1-203ENST00000554230 ARAP1Q96P48 1450 aa22.95■■□□□ 1.26
GNPNAT1-203ENST00000554230 ARHGAP35Q9NRY4 1499 aa22.9■■□□□ 1.26
GNPNAT1-203ENST00000554230 ADAMTS12P58397 1594 aa22.85■■□□□ 1.25
GNPNAT1-203ENST00000554230 RANGAP1P46060 587 aaPredicted RBP22.84■■□□□ 1.25
GNPNAT1-203ENST00000554230 AQRO60306 1485 aaKnown RBP eCLIP22.83■■□□□ 1.255e-11■■□□□ 13.4
GNPNAT1-203ENST00000554230 GRIN2BQ13224 1484 aa22.83■■□□□ 1.24
GNPNAT1-203ENST00000554230 ZNF608Q9ULD9 1512 aaPredicted RBP22.82■■□□□ 1.24
GNPNAT1-203ENST00000554230 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms