RNA–Protein interactions for RNA: ENST00000526202.5

LMO7-218, Transcript of LIM domain 7, humanhuman

TSL 2 BASIC

Gene LMO7, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-218ENST00000526202 PELP1Q8IZL8 1130 aaKnown RBP15.78■□□□□ 0.12
LMO7-218ENST00000526202 MYT1Q01538 1121 aa15.52■□□□□ 0.08
LMO7-218ENST00000526202 HRCP23327 699 aa14.81□□□□□ -0.04
LMO7-218ENST00000526202 NISCHQ9Y2I1 1504 aa14.8□□□□□ -0.04
LMO7-218ENST00000526202 PCGF6Q9BYE7 350 aa14.72□□□□□ -0.05
LMO7-218ENST00000526202 PPARGC1BQ86YN6 1023 aaKnown RBP14.6□□□□□ -0.07
LMO7-218ENST00000526202 TTBK1Q5TCY1 1321 aaPredicted RBP14.47□□□□□ -0.09
LMO7-218ENST00000526202 CENPBP07199 599 aaPredicted RBP14.43□□□□□ -0.1
LMO7-218ENST00000526202 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
LMO7-218ENST00000526202 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.14
LMO7-218ENST00000526202 ZEB1P37275 1124 aaPredicted RBP14.18□□□□□ -0.14
LMO7-218ENST00000526202 ERICH6Q7L0X2 663 aa14.15□□□□□ -0.14
LMO7-218ENST00000526202 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
LMO7-218ENST00000526202 YTHDC1Q96MU7 727 aaKnown RBP14.04□□□□□ -0.16
LMO7-218ENST00000526202 BCL11AQ9H165 835 aa14.04□□□□□ -0.16
LMO7-218ENST00000526202 ACIN1Q9UKV3 1341 aaKnown RBP14□□□□□ -0.17
LMO7-218ENST00000526202 NEUROD1Q13562 356 aa13.83□□□□□ -0.2
LMO7-218ENST00000526202 TRIM26Q12899 539 aaPredicted RBP13.81□□□□□ -0.2
LMO7-218ENST00000526202 DCAF8L2P0C7V8 631 aa13.78□□□□□ -0.2
LMO7-218ENST00000526202 PRKCSHP14314 528 aaPredicted RBP13.77□□□□□ -0.21
LMO7-218ENST00000526202 CCER1Q8TC90 406 aaPredicted RBP13.73□□□□□ -0.21
LMO7-218ENST00000526202 SHROOM4Q9ULL8 1493 aa13.7□□□□□ -0.22
LMO7-218ENST00000526202 DIEXFQ68CQ4 756 aaKnown RBP13.68□□□□□ -0.22
LMO7-218ENST00000526202 FAM9AQ8IZU1 332 aaPredicted RBP13.65□□□□□ -0.22
LMO7-218ENST00000526202 ANP32EQ9BTT0 268 aa13.64□□□□□ -0.23
LMO7-218ENST00000526202 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
LMO7-218ENST00000526202 NEFLP07196 543 aa13.47□□□□□ -0.25
LMO7-218ENST00000526202 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
LMO7-218ENST00000526202 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
LMO7-218ENST00000526202 BCANQ96GW7 911 aa13.38□□□□□ -0.27
LMO7-218ENST00000526202 EIF5BO60841 1220 aaKnown RBP13.38□□□□□ -0.27
LMO7-218ENST00000526202 CHIC1Q5VXU3 224 aa13.38□□□□□ -0.27
LMO7-218ENST00000526202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
LMO7-218ENST00000526202 RTL5Q5HYW3 569 aaPredicted RBP13.29□□□□□ -0.28
LMO7-218ENST00000526202 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
LMO7-218ENST00000526202 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
LMO7-218ENST00000526202 CLSPNQ9HAW4 1339 aa13.11□□□□□ -0.31
LMO7-218ENST00000526202 CCDC136Q96JN2 1154 aa13.1□□□□□ -0.31
LMO7-218ENST00000526202 GLIPR1L2Q4G1C9 344 aa13.09□□□□□ -0.31
LMO7-218ENST00000526202 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
LMO7-218ENST00000526202 RTN4Q9NQC3 1192 aaKnown RBP13.08□□□□□ -0.32
LMO7-218ENST00000526202 APLP2Q06481 763 aa13.07□□□□□ -0.32
LMO7-218ENST00000526202 NBR1Q14596 966 aa13.06□□□□□ -0.32
LMO7-218ENST00000526202 TSHZ2Q9NRE2 1034 aa13.05□□□□□ -0.32
LMO7-218ENST00000526202 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
LMO7-218ENST00000526202 DCAF1Q9Y4B6 1507 aa13.04□□□□□ -0.32
LMO7-218ENST00000526202 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
LMO7-218ENST00000526202 SLC24A1O60721 1099 aa13.03□□□□□ -0.32
LMO7-218ENST00000526202 FKBP8Q14318 412 aa13.02□□□□□ -0.33
LMO7-218ENST00000526202 DEKP35659 375 aaKnown RBP13.01□□□□□ -0.33
LMO7-218ENST00000526202 MIER1Q8N108 512 aa13.01□□□□□ -0.33
LMO7-218ENST00000526202 SUPT16HQ9Y5B9 1047 aaKnown RBP13.01□□□□□ -0.33
LMO7-218ENST00000526202 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
LMO7-218ENST00000526202 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
LMO7-218ENST00000526202 ITGAEP38570 1179 aa12.91□□□□□ -0.34
LMO7-218ENST00000526202 RBM19Q9Y4C8 960 aaKnown RBP12.89□□□□□ -0.35
LMO7-218ENST00000526202 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
LMO7-218ENST00000526202 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
LMO7-218ENST00000526202 PKNOX2Q96KN3 472 aa12.83□□□□□ -0.36
LMO7-218ENST00000526202 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
LMO7-218ENST00000526202 PODXL2Q9NZ53 605 aa12.8□□□□□ -0.36
LMO7-218ENST00000526202 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
LMO7-218ENST00000526202 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
LMO7-218ENST00000526202 ANP32AP39687 249 aaKnown RBP12.78□□□□□ -0.36
LMO7-218ENST00000526202 UBE2Q2Q8WVN8 375 aa12.72□□□□□ -0.37
LMO7-218ENST00000526202 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
LMO7-218ENST00000526202 VSIG10Q8N0Z9 540 aa12.66□□□□□ -0.38
LMO7-218ENST00000526202 NPM2Q86SE8 214 aaKnown RBP12.66□□□□□ -0.38
LMO7-218ENST00000526202 NOP58Q9Y2X3 529 aaKnown RBP12.63□□□□□ -0.39
LMO7-218ENST00000526202 ABCC9O60706 1549 aa12.62□□□□□ -0.39
LMO7-218ENST00000526202 NEFMP07197 916 aa12.62□□□□□ -0.39
LMO7-218ENST00000526202 IRX6P78412 446 aaPredicted RBP12.6□□□□□ -0.39
LMO7-218ENST00000526202 A0A0U1RQG5 324 aaPredicted RBP12.6□□□□□ -0.39
LMO7-218ENST00000526202 TRIM52Q96A61 297 aa12.6□□□□□ -0.39
LMO7-218ENST00000526202 TIMELESSQ9UNS1 1208 aa12.59□□□□□ -0.39
LMO7-218ENST00000526202 PLEKHG5O94827 1062 aa12.56□□□□□ -0.4
LMO7-218ENST00000526202 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
LMO7-218ENST00000526202 UBTFP17480 764 aaKnown RBP12.52□□□□□ -0.4
LMO7-218ENST00000526202 ANP32CO43423 234 aa12.51□□□□□ -0.41
LMO7-218ENST00000526202 NAP1L5Q96NT1 182 aaPredicted RBP12.5□□□□□ -0.41
LMO7-218ENST00000526202 RANGAP1P46060 587 aaPredicted RBP12.49□□□□□ -0.41
LMO7-218ENST00000526202 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
LMO7-218ENST00000526202 FANCIQ9NVI1 1328 aa12.45□□□□□ -0.42
LMO7-218ENST00000526202 ARXQ96QS3 562 aa12.45□□□□□ -0.42
LMO7-218ENST00000526202 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
LMO7-218ENST00000526202 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
LMO7-218ENST00000526202 MSH5O43196 834 aa12.41□□□□□ -0.42
LMO7-218ENST00000526202 DDX10Q13206 875 aaKnown RBP12.4□□□□□ -0.42
LMO7-218ENST00000526202 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
LMO7-218ENST00000526202 CNGB1Q14028 1251 aaPredicted RBP12.38□□□□□ -0.43
LMO7-218ENST00000526202 ARID4BQ4LE39 1312 aaPredicted RBP12.37□□□□□ -0.43
LMO7-218ENST00000526202 HSP90AA1P07900 732 aaKnown RBP12.37□□□□□ -0.43
LMO7-218ENST00000526202 PPM1GO15355 546 aaPredicted RBP12.37□□□□□ -0.43
LMO7-218ENST00000526202 ZCCHC6Q5VYS8 1495 aaKnown RBP12.34□□□□□ -0.43
LMO7-218ENST00000526202 ZMYND15Q9H091 742 aa12.32□□□□□ -0.44
LMO7-218ENST00000526202 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
LMO7-218ENST00000526202 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
LMO7-218ENST00000526202 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
LMO7-218ENST00000526202 PDE4CQ08493 712 aa12.28□□□□□ -0.44
LMO7-218ENST00000526202 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms