RNA–Protein interactions for RNA: ENST00000358598.6

PRKAR1A-201, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-201ENST00000358598 NISCHQ9Y2I1 1504 aa22.4■■□□□ 1.18
PRKAR1A-201ENST00000358598 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
PRKAR1A-201ENST00000358598 DCAF8L2P0C7V8 631 aa19.61■□□□□ 0.73
PRKAR1A-201ENST00000358598 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
PRKAR1A-201ENST00000358598 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
PRKAR1A-201ENST00000358598 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
PRKAR1A-201ENST00000358598 CHIC1Q5VXU3 224 aa18.31■□□□□ 0.52
PRKAR1A-201ENST00000358598 ABCC9O60706 1549 aa18.24■□□□□ 0.51
PRKAR1A-201ENST00000358598 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
PRKAR1A-201ENST00000358598 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
PRKAR1A-201ENST00000358598 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
PRKAR1A-201ENST00000358598 LOC105371045A0A1W2PR82 267 aa17.97■□□□□ 0.47
PRKAR1A-201ENST00000358598 MYO15BQ96JP2 1530 aa17.96■□□□□ 0.47
PRKAR1A-201ENST00000358598 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
PRKAR1A-201ENST00000358598 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
PRKAR1A-201ENST00000358598 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
PRKAR1A-201ENST00000358598 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
PRKAR1A-201ENST00000358598 NACADO15069 1562 aa17.65■□□□□ 0.42
PRKAR1A-201ENST00000358598 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
PRKAR1A-201ENST00000358598 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
PRKAR1A-201ENST00000358598 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
PRKAR1A-201ENST00000358598 HRCP23327 699 aa17.48■□□□□ 0.39
PRKAR1A-201ENST00000358598 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
PRKAR1A-201ENST00000358598 PPARGC1BQ86YN6 1023 aaKnown RBP17.41■□□□□ 0.38
PRKAR1A-201ENST00000358598 TRIM26Q12899 539 aaPredicted RBP17.37■□□□□ 0.37
PRKAR1A-201ENST00000358598 TTBK1Q5TCY1 1321 aaPredicted RBP17.32■□□□□ 0.36
PRKAR1A-201ENST00000358598 WIZO95785 1651 aa17.31■□□□□ 0.36
PRKAR1A-201ENST00000358598 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
PRKAR1A-201ENST00000358598 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
PRKAR1A-201ENST00000358598 RANGAP1P46060 587 aaPredicted RBP17.12■□□□□ 0.33
PRKAR1A-201ENST00000358598 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
PRKAR1A-201ENST00000358598 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
PRKAR1A-201ENST00000358598 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
PRKAR1A-201ENST00000358598 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
PRKAR1A-201ENST00000358598 CSRNP3Q8WYN3 585 aa16.97■□□□□ 0.31
PRKAR1A-201ENST00000358598 ZEB1P37275 1124 aaPredicted RBP16.92■□□□□ 0.3
PRKAR1A-201ENST00000358598 CCER1Q8TC90 406 aaPredicted RBP16.92■□□□□ 0.3
PRKAR1A-201ENST00000358598 SOGA1O94964 1423 aa16.92■□□□□ 0.3
PRKAR1A-201ENST00000358598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
PRKAR1A-201ENST00000358598 SMARCA2P51531 1590 aa16.88■□□□□ 0.29
PRKAR1A-201ENST00000358598 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
PRKAR1A-201ENST00000358598 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
PRKAR1A-201ENST00000358598 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.29
PRKAR1A-201ENST00000358598 APLP2Q06481 763 aa16.83■□□□□ 0.29
PRKAR1A-201ENST00000358598 WRNQ14191 1432 aaPredicted RBP eCLIP16.83■□□□□ 0.28
PRKAR1A-201ENST00000358598 RUSC2Q8N2Y8 1516 aa16.78■□□□□ 0.28
PRKAR1A-201ENST00000358598 ATAD2BQ9ULI0 1458 aa16.77■□□□□ 0.28
PRKAR1A-201ENST00000358598 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
PRKAR1A-201ENST00000358598 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
PRKAR1A-201ENST00000358598 TNIKQ9UKE5 1360 aa16.68■□□□□ 0.26
PRKAR1A-201ENST00000358598 EEA1Q15075 1411 aa16.66■□□□□ 0.26
PRKAR1A-201ENST00000358598 EIF4G1Q04637 1599 aaKnown RBP16.66■□□□□ 0.26
PRKAR1A-201ENST00000358598 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
PRKAR1A-201ENST00000358598 CLIP1P30622 1438 aa16.56■□□□□ 0.24
PRKAR1A-201ENST00000358598 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
PRKAR1A-201ENST00000358598 SYNJ1O43426 1573 aa16.52■□□□□ 0.24
PRKAR1A-201ENST00000358598 ATP1B4Q9UN42 357 aaPredicted RBP16.52■□□□□ 0.24
PRKAR1A-201ENST00000358598 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
PRKAR1A-201ENST00000358598 RAPGEF2Q9Y4G8 1499 aa16.46■□□□□ 0.23
PRKAR1A-201ENST00000358598 ITGAEP38570 1179 aa16.46■□□□□ 0.23
PRKAR1A-201ENST00000358598 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
PRKAR1A-201ENST00000358598 P3H3Q8IVL6 736 aa16.38■□□□□ 0.21
PRKAR1A-201ENST00000358598 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
PRKAR1A-201ENST00000358598 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
PRKAR1A-201ENST00000358598 VPS8Q8N3P4 1428 aa16.33■□□□□ 0.2
PRKAR1A-201ENST00000358598 CUX2O14529 1486 aa16.27■□□□□ 0.2
PRKAR1A-201ENST00000358598 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
PRKAR1A-201ENST00000358598 KANK4Q5T7N3 995 aaPredicted RBP16.27■□□□□ 0.19
PRKAR1A-201ENST00000358598 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
PRKAR1A-201ENST00000358598 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
PRKAR1A-201ENST00000358598 CFTRP13569 1480 aa16.25■□□□□ 0.19
PRKAR1A-201ENST00000358598 KIF21BO75037 1637 aa16.24■□□□□ 0.19
PRKAR1A-201ENST00000358598 CUX1P39880 1505 aa16.24■□□□□ 0.19
PRKAR1A-201ENST00000358598 YTHDC1Q96MU7 727 aaKnown RBP16.23■□□□□ 0.19
PRKAR1A-201ENST00000358598 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
PRKAR1A-201ENST00000358598 FAM50AQ14320 339 aaKnown RBP16.19■□□□□ 0.18
PRKAR1A-201ENST00000358598 CARMIL1Q5VZK9 1371 aa16.17■□□□□ 0.18
PRKAR1A-201ENST00000358598 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
PRKAR1A-201ENST00000358598 IGF1RP08069 1367 aa16.14■□□□□ 0.17
PRKAR1A-201ENST00000358598 CENPBP07199 599 aaPredicted RBP16.12■□□□□ 0.17
PRKAR1A-201ENST00000358598 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
PRKAR1A-201ENST00000358598 FGD5Q6ZNL6 1462 aa16.11■□□□□ 0.17
PRKAR1A-201ENST00000358598 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
PRKAR1A-201ENST00000358598 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
PRKAR1A-201ENST00000358598 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
PRKAR1A-201ENST00000358598 BIVM-ERCC5R4GMW8 1640 aa16.07■□□□□ 0.16
PRKAR1A-201ENST00000358598 NESP48681 1621 aa16.07■□□□□ 0.16
PRKAR1A-201ENST00000358598 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
PRKAR1A-201ENST00000358598 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
PRKAR1A-201ENST00000358598 ARID3CA6NKF2 412 aa16.03■□□□□ 0.16
PRKAR1A-201ENST00000358598 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
PRKAR1A-201ENST00000358598 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.16
PRKAR1A-201ENST00000358598 NEUROD1Q13562 356 aa16.01■□□□□ 0.15
PRKAR1A-201ENST00000358598 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
PRKAR1A-201ENST00000358598 CCNB3Q8WWL7 1395 aa16■□□□□ 0.15
PRKAR1A-201ENST00000358598 ACIN1Q9UKV3 1341 aaKnown RBP15.98■□□□□ 0.15
PRKAR1A-201ENST00000358598 MIER1Q8N108 512 aa15.97■□□□□ 0.15
PRKAR1A-201ENST00000358598 FHOD3Q2V2M9 1422 aa15.94■□□□□ 0.14
PRKAR1A-201ENST00000358598 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
PRKAR1A-201ENST00000358598 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms