RNA–Protein interactions for RNA: ENST00000536854.6

PRKAR1A-204, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-204ENST00000536854 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
PRKAR1A-204ENST00000536854 CCDC180Q9P1Z9 1646 aa14.36□□□□□ -0.11
PRKAR1A-204ENST00000536854 ABCC9O60706 1549 aa13.78□□□□□ -0.2
PRKAR1A-204ENST00000536854 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
PRKAR1A-204ENST00000536854 NACADO15069 1562 aa13.41□□□□□ -0.26
PRKAR1A-204ENST00000536854 MYO15BQ96JP2 1530 aa13.39□□□□□ -0.27
PRKAR1A-204ENST00000536854 DCAF1Q9Y4B6 1507 aa13.28□□□□□ -0.28
PRKAR1A-204ENST00000536854 ZCCHC6Q5VYS8 1495 aaKnown RBP13.26□□□□□ -0.29
PRKAR1A-204ENST00000536854 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
PRKAR1A-204ENST00000536854 SHROOM4Q9ULL8 1493 aa13.01□□□□□ -0.33
PRKAR1A-204ENST00000536854 BICRAQ9NZM4 1560 aa13.01□□□□□ -0.33
PRKAR1A-204ENST00000536854 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
PRKAR1A-204ENST00000536854 SCRIBQ14160 1630 aa12.87□□□□□ -0.35
PRKAR1A-204ENST00000536854 PABPN1Q86U42 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRKAR1A-204ENST00000536854 EIF4G1Q04637 1599 aaKnown RBP12.64□□□□□ -0.39
PRKAR1A-204ENST00000536854 DNAJC5BQ9UF47 199 aa12.61□□□□□ -0.39
PRKAR1A-204ENST00000536854 CC2D2AQ9P2K1 1620 aa12.6□□□□□ -0.39
PRKAR1A-204ENST00000536854 CECR2Q9BXF3 1484 aa12.45□□□□□ -0.42
PRKAR1A-204ENST00000536854 SMARCA4P51532 1647 aa12.39□□□□□ -0.43
PRKAR1A-204ENST00000536854 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
PRKAR1A-204ENST00000536854 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
PRKAR1A-204ENST00000536854 HMGXB3Q12766 1538 aa12.33□□□□□ -0.44
PRKAR1A-204ENST00000536854 SMARCA2P51531 1590 aa12.32□□□□□ -0.44
PRKAR1A-204ENST00000536854 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
PRKAR1A-204ENST00000536854 ATAD2BQ9ULI0 1458 aa12.26□□□□□ -0.45
PRKAR1A-204ENST00000536854 MROH2BQ7Z745 1585 aa12.19□□□□□ -0.46
PRKAR1A-204ENST00000536854 BAZ1BQ9UIG0 1483 aaKnown RBP12.15□□□□□ -0.46
PRKAR1A-204ENST00000536854 WIZO95785 1651 aa12.09□□□□□ -0.47
PRKAR1A-204ENST00000536854 LAMC3Q9Y6N6 1575 aa12.06□□□□□ -0.48
PRKAR1A-204ENST00000536854 TOP2AP11388 1531 aaKnown RBP12.02□□□□□ -0.49
PRKAR1A-204ENST00000536854 RSF1Q96T23 1441 aaPredicted RBP12□□□□□ -0.49
PRKAR1A-204ENST00000536854 PRDM2Q13029 1718 aa11.99□□□□□ -0.49
PRKAR1A-204ENST00000536854 CUX2O14529 1486 aa11.96□□□□□ -0.49
PRKAR1A-204ENST00000536854 THOC2Q8NI27 1593 aaKnown RBP11.95□□□□□ -0.5
PRKAR1A-204ENST00000536854 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
PRKAR1A-204ENST00000536854 NESP48681 1621 aa11.91□□□□□ -0.5
PRKAR1A-204ENST00000536854 ERCC6Q03468 1493 aa11.91□□□□□ -0.5
PRKAR1A-204ENST00000536854 SUPT5HO00267 1087 aaKnown RBP11.9□□□□□ -0.5
PRKAR1A-204ENST00000536854 CADPSQ9ULU8 1353 aa11.87□□□□□ -0.51
PRKAR1A-204ENST00000536854 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
PRKAR1A-204ENST00000536854 CFTRP13569 1480 aa11.84□□□□□ -0.51
PRKAR1A-204ENST00000536854 WDR62O43379 1518 aa11.82□□□□□ -0.52
PRKAR1A-204ENST00000536854 MRC2Q9UBG0 1479 aa11.79□□□□□ -0.52
PRKAR1A-204ENST00000536854 CCDC88BA6NC98 1476 aa11.77□□□□□ -0.53
PRKAR1A-204ENST00000536854 CEP164Q9UPV0 1460 aa11.77□□□□□ -0.53
PRKAR1A-204ENST00000536854 FANCD2Q9BXW9 1451 aa11.75□□□□□ -0.53
PRKAR1A-204ENST00000536854 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.54
PRKAR1A-204ENST00000536854 ABCC8Q09428 1581 aa11.64□□□□□ -0.55
PRKAR1A-204ENST00000536854 DNMBPQ6XZF7 1577 aa11.63□□□□□ -0.55
PRKAR1A-204ENST00000536854 TOPBP1Q92547 1522 aa11.58□□□□□ -0.56
PRKAR1A-204ENST00000536854 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
PRKAR1A-204ENST00000536854 IFT140Q96RY7 1462 aa11.55□□□□□ -0.56
PRKAR1A-204ENST00000536854 TARBP1Q13395 1621 aaKnown RBP11.54□□□□□ -0.56
PRKAR1A-204ENST00000536854 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
PRKAR1A-204ENST00000536854 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
PRKAR1A-204ENST00000536854 BIVM-ERCC5R4GMW8 1640 aa11.48□□□□□ -0.57
PRKAR1A-204ENST00000536854 CUX1P39880 1505 aa11.47□□□□□ -0.57
PRKAR1A-204ENST00000536854 POLA1P09884 1462 aaPredicted RBP11.46□□□□□ -0.58
PRKAR1A-204ENST00000536854 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
PRKAR1A-204ENST00000536854 FGD5Q6ZNL6 1462 aa11.41□□□□□ -0.58
PRKAR1A-204ENST00000536854 PBRM1Q86U86 1689 aa11.41□□□□□ -0.58
PRKAR1A-204ENST00000536854 ZNF608Q9ULD9 1512 aaPredicted RBP11.41□□□□□ -0.58
PRKAR1A-204ENST00000536854 ABCA5Q8WWZ7 1642 aa11.39□□□□□ -0.59
PRKAR1A-204ENST00000536854 CHD1O14646 1710 aa11.39□□□□□ -0.59
PRKAR1A-204ENST00000536854 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
PRKAR1A-204ENST00000536854 SYNJ1O43426 1573 aa11.36□□□□□ -0.59
PRKAR1A-204ENST00000536854 SOGA1O94964 1423 aa11.35□□□□□ -0.59
PRKAR1A-204ENST00000536854 RAD54L2Q9Y4B4 1467 aa11.33□□□□□ -0.6
PRKAR1A-204ENST00000536854 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
PRKAR1A-204ENST00000536854 WRNQ14191 1432 aaPredicted RBP eCLIP11.31□□□□□ -0.6
PRKAR1A-204ENST00000536854 GRIN2BQ13224 1484 aa11.3□□□□□ -0.6
PRKAR1A-204ENST00000536854 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■■■□ 26.2
PRKAR1A-204ENST00000536854 SNAPC4Q5SXM2 1469 aa11.27□□□□□ -0.61
PRKAR1A-204ENST00000536854 ADAMTS12P58397 1594 aa11.27□□□□□ -0.61
PRKAR1A-204ENST00000536854 CLASP1Q7Z460 1538 aa11.26□□□□□ -0.61
PRKAR1A-204ENST00000536854 GAPVD1Q14C86 1478 aa11.26□□□□□ -0.61
PRKAR1A-204ENST00000536854 ERICH3Q5RHP9 1530 aa11.26□□□□□ -0.61
PRKAR1A-204ENST00000536854 SYNJ2O15056 1496 aa11.25□□□□□ -0.61
PRKAR1A-204ENST00000536854 RIMBP3CA6NJZ7 1639 aa11.25□□□□□ -0.61
PRKAR1A-204ENST00000536854 RIMBP3BA6NNM3 1639 aa11.25□□□□□ -0.61
PRKAR1A-204ENST00000536854 RIMBP3Q9UFD9 1639 aa11.25□□□□□ -0.61
PRKAR1A-204ENST00000536854 OSCARQ8IYS5 282 aa11.24□□□□□ -0.61
PRKAR1A-204ENST00000536854 TRIM41Q8WV44 630 aa11.23□□□□□ -0.61
PRKAR1A-204ENST00000536854 TDRD9Q8NDG6 1382 aaKnown RBP11.22□□□□□ -0.61
PRKAR1A-204ENST00000536854 CUL7Q14999 1698 aa11.19□□□□□ -0.62
PRKAR1A-204ENST00000536854 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
PRKAR1A-204ENST00000536854 SHROOM2Q13796 1616 aa11.17□□□□□ -0.62
PRKAR1A-204ENST00000536854 GRIN2AQ12879 1464 aa11.16□□□□□ -0.62
PRKAR1A-204ENST00000536854 FHAD1B1AJZ9 1412 aa11.15□□□□□ -0.62
PRKAR1A-204ENST00000536854 CEP170Q5SW79 1584 aa11.14□□□□□ -0.63
PRKAR1A-204ENST00000536854 NUP160Q12769 1436 aa11.14□□□□□ -0.63
PRKAR1A-204ENST00000536854 RUSC2Q8N2Y8 1516 aa11.11□□□□□ -0.63
PRKAR1A-204ENST00000536854 KIF27Q86VH2 1401 aa11.09□□□□□ -0.63
PRKAR1A-204ENST00000536854 CHIC1Q5VXU3 224 aa11.08□□□□□ -0.63
PRKAR1A-204ENST00000536854 ARAP1Q96P48 1450 aa11.08□□□□□ -0.64
PRKAR1A-204ENST00000536854 CHMP7Q8WUX9 453 aaPredicted RBP11.07□□□□□ -0.64
PRKAR1A-204ENST00000536854 FAM9AQ8IZU1 332 aaPredicted RBP11.03□□□□□ -0.64
PRKAR1A-204ENST00000536854 FBLN2P98095 1184 aa11.02□□□□□ -0.65
PRKAR1A-204ENST00000536854 IGF1RP08069 1367 aa11.01□□□□□ -0.65
PRKAR1A-204ENST00000536854 CTTNBP2Q8WZ74 1663 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms