RNA–Protein interactions for RNA: ENST00000494682.1

SFT2D1-206, Transcript of SFT2 domain containing 1, humanhuman

TSL 3

Gene SFT2D1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-206ENST00000494682 AEBP2Q6ZN18 517 aaPredicted RBP18.81■□□□□ 0.6
SFT2D1-206ENST00000494682 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
SFT2D1-206ENST00000494682 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
SFT2D1-206ENST00000494682 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
SFT2D1-206ENST00000494682 PLPPR3Q6T4P5 718 aa15.26■□□□□ 0.03
SFT2D1-206ENST00000494682 FOXD1Q16676 465 aa14.78□□□□□ -0.04
SFT2D1-206ENST00000494682 ADRA2BP18089 450 aa14.41□□□□□ -0.1
SFT2D1-206ENST00000494682 PPP6R1Q9UPN7 881 aa14.37□□□□□ -0.11
SFT2D1-206ENST00000494682 PIAS4Q8N2W9 510 aaPredicted RBP14.05□□□□□ -0.16
SFT2D1-206ENST00000494682 MSH5O43196 834 aa13.59□□□□□ -0.23
SFT2D1-206ENST00000494682 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
SFT2D1-206ENST00000494682 KCNA4P22459 653 aa13.38□□□□□ -0.27
SFT2D1-206ENST00000494682 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
SFT2D1-206ENST00000494682 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
SFT2D1-206ENST00000494682 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
SFT2D1-206ENST00000494682 POTEDQ86YR6 584 aa13.01□□□□□ -0.33
SFT2D1-206ENST00000494682 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
SFT2D1-206ENST00000494682 NPM3O75607 178 aaKnown RBP12.97□□□□□ -0.33
SFT2D1-206ENST00000494682 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
SFT2D1-206ENST00000494682 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
SFT2D1-206ENST00000494682 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
SFT2D1-206ENST00000494682 RNF216Q9NWF9 866 aaPredicted RBP12.72□□□□□ -0.37
SFT2D1-206ENST00000494682 HOXD11P31277 338 aaPredicted RBP12.58□□□□□ -0.4
SFT2D1-206ENST00000494682 DNAJC5BQ9UF47 199 aa12.49□□□□□ -0.41
SFT2D1-206ENST00000494682 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
SFT2D1-206ENST00000494682 DCAF8L1A6NGE4 600 aa12.31□□□□□ -0.44
SFT2D1-206ENST00000494682 ZBTB22O15209 634 aa12.29□□□□□ -0.44
SFT2D1-206ENST00000494682 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
SFT2D1-206ENST00000494682 SLC4A2P04920 1241 aa12.16□□□□□ -0.46
SFT2D1-206ENST00000494682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.48
SFT2D1-206ENST00000494682 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
SFT2D1-206ENST00000494682 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
SFT2D1-206ENST00000494682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
SFT2D1-206ENST00000494682 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
SFT2D1-206ENST00000494682 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
SFT2D1-206ENST00000494682 SAMD1Q6SPF0 538 aaPredicted RBP11.78□□□□□ -0.52
SFT2D1-206ENST00000494682 APLP2Q06481 763 aa11.67□□□□□ -0.54
SFT2D1-206ENST00000494682 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
SFT2D1-206ENST00000494682 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
SFT2D1-206ENST00000494682 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
SFT2D1-206ENST00000494682 ZNF219Q9P2Y4 722 aaPredicted RBP11.46□□□□□ -0.57
SFT2D1-206ENST00000494682 CAPN15O75808 1086 aa11.45□□□□□ -0.58
SFT2D1-206ENST00000494682 TRHP20396 242 aaPredicted RBP11.45□□□□□ -0.58
SFT2D1-206ENST00000494682 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
SFT2D1-206ENST00000494682 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
SFT2D1-206ENST00000494682 POLA2Q14181 598 aa11.28□□□□□ -0.6
SFT2D1-206ENST00000494682 FKBP8Q14318 412 aa11.27□□□□□ -0.61
SFT2D1-206ENST00000494682 ABCB7O75027 752 aa11.24□□□□□ -0.61
SFT2D1-206ENST00000494682 FBLN2P98095 1184 aa11.2□□□□□ -0.62
SFT2D1-206ENST00000494682 DSG3P32926 999 aa11.15□□□□□ -0.62
SFT2D1-206ENST00000494682 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
SFT2D1-206ENST00000494682 MKRN4PQ13434 485 aaPredicted RBP11.12□□□□□ -0.63
SFT2D1-206ENST00000494682 SPDYE4A6NLX3 237 aa11.04□□□□□ -0.64
SFT2D1-206ENST00000494682 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
SFT2D1-206ENST00000494682 ZNF692Q9BU19 519 aaPredicted RBP10.85□□□□□ -0.67
SFT2D1-206ENST00000494682 SPDYE2BA6NHP3 402 aa10.83□□□□□ -0.68
SFT2D1-206ENST00000494682 SPDYE6P0CI01 402 aa10.83□□□□□ -0.68
SFT2D1-206ENST00000494682 SPDYE2Q495Y8 402 aa10.83□□□□□ -0.68
SFT2D1-206ENST00000494682 FBXO3Q9UK99 471 aa10.82□□□□□ -0.68
SFT2D1-206ENST00000494682 PROM2Q8N271 834 aa10.81□□□□□ -0.68
SFT2D1-206ENST00000494682 SSUH2Q9Y2M2 353 aa10.74□□□□□ -0.69
SFT2D1-206ENST00000494682 PABPN1Q86U42 306 aaKnown RBP eCLIP10.7□□□□□ -0.7
SFT2D1-206ENST00000494682 RBM42Q9BTD8 480 aaKnown RBP10.67□□□□□ -0.7
SFT2D1-206ENST00000494682 AMER1Q5JTC6 1135 aaPredicted RBP10.65□□□□□ -0.7
SFT2D1-206ENST00000494682 VASPP50552 380 aaPredicted RBP10.64□□□□□ -0.71
SFT2D1-206ENST00000494682 RTN4Q9NQC3 1192 aaKnown RBP10.6□□□□□ -0.71
SFT2D1-206ENST00000494682 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
SFT2D1-206ENST00000494682 AKT1S1Q96B36 256 aa10.55□□□□□ -0.72
SFT2D1-206ENST00000494682 PLCD3Q8N3E9 789 aa10.5□□□□□ -0.73
SFT2D1-206ENST00000494682 IFNLR1Q8IU57 520 aaPredicted RBP10.48□□□□□ -0.73
SFT2D1-206ENST00000494682 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
SFT2D1-206ENST00000494682 MIER1Q8N108 512 aa10.47□□□□□ -0.73
SFT2D1-206ENST00000494682 KLHL34Q8N239 644 aa10.47□□□□□ -0.73
SFT2D1-206ENST00000494682 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
SFT2D1-206ENST00000494682 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
SFT2D1-206ENST00000494682 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
SFT2D1-206ENST00000494682 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
SFT2D1-206ENST00000494682 SPOCK2Q92563 424 aa10.37□□□□□ -0.75
SFT2D1-206ENST00000494682 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
SFT2D1-206ENST00000494682 PITPNM1O00562 1244 aa10.33□□□□□ -0.76
SFT2D1-206ENST00000494682 CREBZFQ9NS37 354 aa10.23□□□□□ -0.77
SFT2D1-206ENST00000494682 PKD2Q13563 968 aa10.21□□□□□ -0.77
SFT2D1-206ENST00000494682 POTEHQ6S545 545 aa10.2□□□□□ -0.78
SFT2D1-206ENST00000494682 CIZ1Q9ULV3 898 aaPredicted RBP10.2□□□□□ -0.78
SFT2D1-206ENST00000494682 DCAF8L2P0C7V8 631 aa10.19□□□□□ -0.78
SFT2D1-206ENST00000494682 ECM2O94769 699 aaPredicted RBP10.16□□□□□ -0.78
SFT2D1-206ENST00000494682 CHADLQ6NUI6 762 aa10.14□□□□□ -0.79
SFT2D1-206ENST00000494682 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
SFT2D1-206ENST00000494682 MNX1P50219 401 aaPredicted RBP10.13□□□□□ -0.79
SFT2D1-206ENST00000494682 GSE1Q14687 1217 aa10.12□□□□□ -0.79
SFT2D1-206ENST00000494682 NUBP1P53384 320 aa10.11□□□□□ -0.79
SFT2D1-206ENST00000494682 CHRDL2Q6WN34 429 aa10.11□□□□□ -0.79
SFT2D1-206ENST00000494682 PRKAR2AP13861 404 aaKnown RBP10.1□□□□□ -0.79
SFT2D1-206ENST00000494682 DCAF8Q5TAQ9 597 aa10.1□□□□□ -0.79
SFT2D1-206ENST00000494682 FAM212AQ96EL1 285 aa10.1□□□□□ -0.79
SFT2D1-206ENST00000494682 TRIM41Q8WV44 630 aa10.08□□□□□ -0.8
SFT2D1-206ENST00000494682 FXR2P51116 673 aaKnown RBP eCLIP10.07□□□□□ -0.8
SFT2D1-206ENST00000494682 FARP1Q9Y4F1 1045 aaPredicted RBP10.05□□□□□ -0.8
SFT2D1-206ENST00000494682 RASEFQ8IZ41 740 aa10.04□□□□□ -0.8
SFT2D1-206ENST00000494682 RGL2O15211 777 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms