RNA–Protein interactions for RNA: ENST00000273398.7

ATP6V1A-201, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1A, Length 4,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-201ENST00000273398 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
ATP6V1A-201ENST00000273398 AEBP2Q6ZN18 517 aaPredicted RBP16.2■□□□□ 0.18
ATP6V1A-201ENST00000273398 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
ATP6V1A-201ENST00000273398 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.04
ATP6V1A-201ENST00000273398 PLPPR3Q6T4P5 718 aa14.36□□□□□ -0.11
ATP6V1A-201ENST00000273398 KCNA4P22459 653 aa13.88□□□□□ -0.19
ATP6V1A-201ENST00000273398 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
ATP6V1A-201ENST00000273398 SENP3Q9H4L4 574 aaPredicted RBP13.76□□□□□ -0.21
ATP6V1A-201ENST00000273398 ADRA2BP18089 450 aa13.59□□□□□ -0.23
ATP6V1A-201ENST00000273398 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
ATP6V1A-201ENST00000273398 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
ATP6V1A-201ENST00000273398 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
ATP6V1A-201ENST00000273398 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.33
ATP6V1A-201ENST00000273398 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
ATP6V1A-201ENST00000273398 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
ATP6V1A-201ENST00000273398 DCAF8L2P0C7V8 631 aa12.88□□□□□ -0.35
ATP6V1A-201ENST00000273398 PPP4R3CPQ6ZMV5 832 aa12.86□□□□□ -0.35
ATP6V1A-201ENST00000273398 PIAS4Q8N2W9 510 aaPredicted RBP12.64□□□□□ -0.39
ATP6V1A-201ENST00000273398 FOXD1Q16676 465 aa12.62□□□□□ -0.39
ATP6V1A-201ENST00000273398 FKBP8Q14318 412 aa12.61□□□□□ -0.39
ATP6V1A-201ENST00000273398 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
ATP6V1A-201ENST00000273398 ZBTB22O15209 634 aa12.47□□□□□ -0.41
ATP6V1A-201ENST00000273398 HAP1P54257 671 aaPredicted RBP12.45□□□□□ -0.42
ATP6V1A-201ENST00000273398 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
ATP6V1A-201ENST00000273398 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
ATP6V1A-201ENST00000273398 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
ATP6V1A-201ENST00000273398 TPRNQ4KMQ1 711 aa12.1□□□□□ -0.47
ATP6V1A-201ENST00000273398 BCANQ96GW7 911 aa12.09□□□□□ -0.47
ATP6V1A-201ENST00000273398 CNKSR2Q8WXI2 1034 aa12.09□□□□□ -0.47
ATP6V1A-201ENST00000273398 PLCB2Q00722 1185 aa11.94□□□□□ -0.5
ATP6V1A-201ENST00000273398 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
ATP6V1A-201ENST00000273398 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
ATP6V1A-201ENST00000273398 DCAF8L1A6NGE4 600 aa11.85□□□□□ -0.51
ATP6V1A-201ENST00000273398 TULP1O00294 542 aaPredicted RBP11.83□□□□□ -0.52
ATP6V1A-201ENST00000273398 MAPK8IP2Q13387 824 aaPredicted RBP11.81□□□□□ -0.52
ATP6V1A-201ENST00000273398 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
ATP6V1A-201ENST00000273398 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
ATP6V1A-201ENST00000273398 NBR1Q14596 966 aa11.7□□□□□ -0.54
ATP6V1A-201ENST00000273398 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
ATP6V1A-201ENST00000273398 NISCHQ9Y2I1 1504 aa11.68□□□□□ -0.54
ATP6V1A-201ENST00000273398 MYCNP04198 464 aaPredicted RBP11.59□□□□□ -0.55
ATP6V1A-201ENST00000273398 RANGAP1P46060 587 aaPredicted RBP11.59□□□□□ -0.55
ATP6V1A-201ENST00000273398 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
ATP6V1A-201ENST00000273398 TIMELESSQ9UNS1 1208 aa11.55□□□□□ -0.56
ATP6V1A-201ENST00000273398 C14orf37Q86TY3 774 aa11.52□□□□□ -0.57
ATP6V1A-201ENST00000273398 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
ATP6V1A-201ENST00000273398 FBLN2P98095 1184 aa11.5□□□□□ -0.57
ATP6V1A-201ENST00000273398 VSIG10Q8N0Z9 540 aa11.48□□□□□ -0.57
ATP6V1A-201ENST00000273398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.44□□□□□ -0.58
ATP6V1A-201ENST00000273398 RNF216Q9NWF9 866 aaPredicted RBP11.41□□□□□ -0.58
ATP6V1A-201ENST00000273398 GTF3C3Q9Y5Q9 886 aa11.41□□□□□ -0.58
ATP6V1A-201ENST00000273398 SLC4A2P04920 1241 aa11.39□□□□□ -0.59
ATP6V1A-201ENST00000273398 ECM2O94769 699 aaPredicted RBP11.39□□□□□ -0.59
ATP6V1A-201ENST00000273398 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
ATP6V1A-201ENST00000273398 SUPT5HO00267 1087 aaKnown RBP11.35□□□□□ -0.59
ATP6V1A-201ENST00000273398 HOMEZQ8IX15 550 aa11.35□□□□□ -0.59
ATP6V1A-201ENST00000273398 ATXN8OSP0DMR3 200 aa11.33□□□□□ -0.6
ATP6V1A-201ENST00000273398 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
ATP6V1A-201ENST00000273398 CHGAP10645 457 aaKnown RBP11.31□□□□□ -0.6
ATP6V1A-201ENST00000273398 SPRYD3Q8NCJ5 442 aa11.31□□□□□ -0.6
ATP6V1A-201ENST00000273398 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
ATP6V1A-201ENST00000273398 KDM2AQ9Y2K7 1162 aa11.3□□□□□ -0.6
ATP6V1A-201ENST00000273398 TSHZ2Q9NRE2 1034 aa11.29□□□□□ -0.6
ATP6V1A-201ENST00000273398 PODXL2Q9NZ53 605 aa11.27□□□□□ -0.61
ATP6V1A-201ENST00000273398 PLCD3Q8N3E9 789 aa11.26□□□□□ -0.61
ATP6V1A-201ENST00000273398 ARXQ96QS3 562 aa11.26□□□□□ -0.61
ATP6V1A-201ENST00000273398 MSH5O43196 834 aa11.21□□□□□ -0.62
ATP6V1A-201ENST00000273398 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
ATP6V1A-201ENST00000273398 ARID3AQ99856 593 aa11.18□□□□□ -0.62
ATP6V1A-201ENST00000273398 IFNLR1Q8IU57 520 aaPredicted RBP11.14□□□□□ -0.63
ATP6V1A-201ENST00000273398 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
ATP6V1A-201ENST00000273398 SAMD1Q6SPF0 538 aaPredicted RBP11.11□□□□□ -0.63
ATP6V1A-201ENST00000273398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
ATP6V1A-201ENST00000273398 HNRNPUL2Q1KMD3 747 aaKnown RBP11.1□□□□□ -0.63
ATP6V1A-201ENST00000273398 ERICH6Q7L0X2 663 aa11.1□□□□□ -0.63
ATP6V1A-201ENST00000273398 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
ATP6V1A-201ENST00000273398 TRHP20396 242 aaPredicted RBP11.08□□□□□ -0.64
ATP6V1A-201ENST00000273398 PKD2Q13563 968 aa11.06□□□□□ -0.64
ATP6V1A-201ENST00000273398 MIER1Q8N108 512 aa11.05□□□□□ -0.64
ATP6V1A-201ENST00000273398 SPOCK2Q92563 424 aa11□□□□□ -0.65
ATP6V1A-201ENST00000273398 TMEM132AQ24JP5 1023 aa10.98□□□□□ -0.65
ATP6V1A-201ENST00000273398 NPM1P06748 294 aaKnown RBP eCLIP10.98□□□□□ -0.65
ATP6V1A-201ENST00000273398 RGL2O15211 777 aa10.97□□□□□ -0.65
ATP6V1A-201ENST00000273398 ZNF219Q9P2Y4 722 aaPredicted RBP10.97□□□□□ -0.65
ATP6V1A-201ENST00000273398 PLEKHG5O94827 1062 aa10.96□□□□□ -0.65
ATP6V1A-201ENST00000273398 NEUROD2Q15784 382 aa10.91□□□□□ -0.66
ATP6V1A-201ENST00000273398 DMRT2Q9Y5R5 561 aa10.9□□□□□ -0.67
ATP6V1A-201ENST00000273398 HOXD11P31277 338 aaPredicted RBP10.89□□□□□ -0.67
ATP6V1A-201ENST00000273398 ATP1B4Q9UN42 357 aaPredicted RBP10.87□□□□□ -0.67
ATP6V1A-201ENST00000273398 WDR70Q9NW82 654 aa10.83□□□□□ -0.68
ATP6V1A-201ENST00000273398 NPM2Q86SE8 214 aaKnown RBP10.81□□□□□ -0.68
ATP6V1A-201ENST00000273398 MYT1LQ9UL68 1186 aa10.8□□□□□ -0.68
ATP6V1A-201ENST00000273398 APLP2Q06481 763 aa10.8□□□□□ -0.68
ATP6V1A-201ENST00000273398 CAPN15O75808 1086 aa10.79□□□□□ -0.68
ATP6V1A-201ENST00000273398 STK25O00506 426 aa10.77□□□□□ -0.69
ATP6V1A-201ENST00000273398 POLA2Q14181 598 aa10.74□□□□□ -0.69
ATP6V1A-201ENST00000273398 U3KPZ7 1027 aaPredicted RBP10.74□□□□□ -0.69
ATP6V1A-201ENST00000273398 ABCB7O75027 752 aa10.71□□□□□ -0.7
ATP6V1A-201ENST00000273398 UBTFP17480 764 aaKnown RBP10.69□□□□□ -0.7
ATP6V1A-201ENST00000273398 DNAJC5BQ9UF47 199 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms