RNA–Protein interactions for RNA: ENST00000588188.6

PRKAR1A-214, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3 BASIC

Gene PRKAR1A, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-214ENST00000588188 NISCHQ9Y2I1 1504 aa19.69■□□□□ 0.74
PRKAR1A-214ENST00000588188 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
PRKAR1A-214ENST00000588188 CCDC180Q9P1Z9 1646 aa17.41■□□□□ 0.38
PRKAR1A-214ENST00000588188 CHIC1Q5VXU3 224 aa17.35■□□□□ 0.37
PRKAR1A-214ENST00000588188 ABCC9O60706 1549 aa16.99■□□□□ 0.31
PRKAR1A-214ENST00000588188 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
PRKAR1A-214ENST00000588188 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
PRKAR1A-214ENST00000588188 DCAF1Q9Y4B6 1507 aa16.4■□□□□ 0.22
PRKAR1A-214ENST00000588188 DCAF8L2P0C7V8 631 aa16.38■□□□□ 0.21
PRKAR1A-214ENST00000588188 NACADO15069 1562 aa16.36■□□□□ 0.21
PRKAR1A-214ENST00000588188 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.2
PRKAR1A-214ENST00000588188 UNC13AQ9UPW8 1703 aa15.98■□□□□ 0.15
PRKAR1A-214ENST00000588188 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
PRKAR1A-214ENST00000588188 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
PRKAR1A-214ENST00000588188 SHROOM4Q9ULL8 1493 aa15.81■□□□□ 0.12
PRKAR1A-214ENST00000588188 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
PRKAR1A-214ENST00000588188 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
PRKAR1A-214ENST00000588188 DNAJC5BQ9UF47 199 aa15.45■□□□□ 0.06
PRKAR1A-214ENST00000588188 EIF4G1Q04637 1599 aaKnown RBP15.43■□□□□ 0.06
PRKAR1A-214ENST00000588188 CC2D2AQ9P2K1 1620 aa15.37■□□□□ 0.05
PRKAR1A-214ENST00000588188 PHF23Q9BUL5 403 aaPredicted RBP15.33■□□□□ 0.04
PRKAR1A-214ENST00000588188 CECR2Q9BXF3 1484 aa15.27■□□□□ 0.04
PRKAR1A-214ENST00000588188 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
PRKAR1A-214ENST00000588188 SUPT5HO00267 1087 aaKnown RBP15.26■□□□□ 0.03
PRKAR1A-214ENST00000588188 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
PRKAR1A-214ENST00000588188 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
PRKAR1A-214ENST00000588188 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
PRKAR1A-214ENST00000588188 SMARCA2P51531 1590 aa15.11■□□□□ 0.01
PRKAR1A-214ENST00000588188 ATAD2BQ9ULI0 1458 aa15.04■□□□□ -0
PRKAR1A-214ENST00000588188 NCAPD3P42695 1498 aa15.03■□□□□ -0
PRKAR1A-214ENST00000588188 PEG3Q9GZU2 1588 aa15.02□□□□□ -0.01
PRKAR1A-214ENST00000588188 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
PRKAR1A-214ENST00000588188 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
PRKAR1A-214ENST00000588188 WIZO95785 1651 aa14.95□□□□□ -0.02
PRKAR1A-214ENST00000588188 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
PRKAR1A-214ENST00000588188 CCDC88BA6NC98 1476 aa14.74□□□□□ -0.05
PRKAR1A-214ENST00000588188 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
PRKAR1A-214ENST00000588188 LAMC3Q9Y6N6 1575 aa14.72□□□□□ -0.05
PRKAR1A-214ENST00000588188 NESP48681 1621 aa14.66□□□□□ -0.06
PRKAR1A-214ENST00000588188 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
PRKAR1A-214ENST00000588188 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
PRKAR1A-214ENST00000588188 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
PRKAR1A-214ENST00000588188 CUX2O14529 1486 aa14.54□□□□□ -0.08
PRKAR1A-214ENST00000588188 PRDM2Q13029 1718 aa14.52□□□□□ -0.09
PRKAR1A-214ENST00000588188 CFTRP13569 1480 aa14.5□□□□□ -0.09
PRKAR1A-214ENST00000588188 CEP164Q9UPV0 1460 aa14.49□□□□□ -0.09
PRKAR1A-214ENST00000588188 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
PRKAR1A-214ENST00000588188 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
PRKAR1A-214ENST00000588188 TRIM41Q8WV44 630 aa14.46□□□□□ -0.09
PRKAR1A-214ENST00000588188 FOXD1Q16676 465 aa14.45□□□□□ -0.1
PRKAR1A-214ENST00000588188 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
PRKAR1A-214ENST00000588188 WDR62O43379 1518 aa14.36□□□□□ -0.11
PRKAR1A-214ENST00000588188 WRNQ14191 1432 aaPredicted RBP eCLIP14.35□□□□□ -0.11
PRKAR1A-214ENST00000588188 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
PRKAR1A-214ENST00000588188 URB2Q14146 1524 aaKnown RBP14.27□□□□□ -0.12
PRKAR1A-214ENST00000588188 EEA1Q15075 1411 aa14.25□□□□□ -0.13
PRKAR1A-214ENST00000588188 TOP2BQ02880 1626 aa14.23□□□□□ -0.13
PRKAR1A-214ENST00000588188 DNMBPQ6XZF7 1577 aa14.23□□□□□ -0.13
PRKAR1A-214ENST00000588188 TOPBP1Q92547 1522 aa14.22□□□□□ -0.13
PRKAR1A-214ENST00000588188 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
PRKAR1A-214ENST00000588188 BIVM-ERCC5R4GMW8 1640 aa14.21□□□□□ -0.13
PRKAR1A-214ENST00000588188 CUX1P39880 1505 aa14.16□□□□□ -0.14
PRKAR1A-214ENST00000588188 IFT140Q96RY7 1462 aa14.16□□□□□ -0.14
PRKAR1A-214ENST00000588188 SOGA1O94964 1423 aa14.1□□□□□ -0.15
PRKAR1A-214ENST00000588188 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
PRKAR1A-214ENST00000588188 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
PRKAR1A-214ENST00000588188 FGD5Q6ZNL6 1462 aa14.07□□□□□ -0.16
PRKAR1A-214ENST00000588188 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
PRKAR1A-214ENST00000588188 LOC105371045A0A1W2PR82 267 aa14.04□□□□□ -0.16
PRKAR1A-214ENST00000588188 FAM9AQ8IZU1 332 aaPredicted RBP14.04□□□□□ -0.16
PRKAR1A-214ENST00000588188 EIF4G3O43432 1585 aaKnown RBP14.04□□□□□ -0.16
PRKAR1A-214ENST00000588188 KIF27Q86VH2 1401 aa14.03□□□□□ -0.16
PRKAR1A-214ENST00000588188 WDR97A6NE52 1622 aa14.02□□□□□ -0.16
PRKAR1A-214ENST00000588188 ZNF608Q9ULD9 1512 aaPredicted RBP14.02□□□□□ -0.16
PRKAR1A-214ENST00000588188 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
PRKAR1A-214ENST00000588188 RUSC2Q8N2Y8 1516 aa14.01□□□□□ -0.17
PRKAR1A-214ENST00000588188 RAD54L2Q9Y4B4 1467 aa14□□□□□ -0.17
PRKAR1A-214ENST00000588188 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.171e-6■■■■□ 26.2
PRKAR1A-214ENST00000588188 ABCA10Q8WWZ4 1543 aa13.96□□□□□ -0.17
PRKAR1A-214ENST00000588188 KIF21BO75037 1637 aa13.96□□□□□ -0.17
PRKAR1A-214ENST00000588188 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
PRKAR1A-214ENST00000588188 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
PRKAR1A-214ENST00000588188 TNIKQ9UKE5 1360 aa13.95□□□□□ -0.18
PRKAR1A-214ENST00000588188 PRXQ9BXM0 1461 aa13.94□□□□□ -0.18
PRKAR1A-214ENST00000588188 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
PRKAR1A-214ENST00000588188 PBRM1Q86U86 1689 aa13.91□□□□□ -0.18
PRKAR1A-214ENST00000588188 ERICH3Q5RHP9 1530 aa13.91□□□□□ -0.18
PRKAR1A-214ENST00000588188 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
PRKAR1A-214ENST00000588188 IGF1RP08069 1367 aa13.91□□□□□ -0.18
PRKAR1A-214ENST00000588188 GRIN2BQ13224 1484 aa13.91□□□□□ -0.18
PRKAR1A-214ENST00000588188 GAPVD1Q14C86 1478 aa13.91□□□□□ -0.18
PRKAR1A-214ENST00000588188 FBLN2P98095 1184 aa13.9□□□□□ -0.18
PRKAR1A-214ENST00000588188 CHD1O14646 1710 aa13.89□□□□□ -0.19
PRKAR1A-214ENST00000588188 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
PRKAR1A-214ENST00000588188 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
PRKAR1A-214ENST00000588188 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
PRKAR1A-214ENST00000588188 CHMP7Q8WUX9 453 aaPredicted RBP13.85□□□□□ -0.19
PRKAR1A-214ENST00000588188 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
PRKAR1A-214ENST00000588188 SYNJ2O15056 1496 aa13.81□□□□□ -0.2
PRKAR1A-214ENST00000588188 UBTFP17480 764 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms