RNA–Protein interactions for RNA: ENST00000307714.12

KHDRBS1-201, Transcript of KH RNA binding domain containing, signal transduction associated 1, humanhuman

TSL 1 (best)

Gene KHDRBS1, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS1-201ENST00000307714 NISCHQ9Y2I1 1504 aa40.58■■■■■ 4.09
KHDRBS1-201ENST00000307714 SHROOM4Q9ULL8 1493 aa34.6■■■■□ 3.13
KHDRBS1-201ENST00000307714 CCDC180Q9P1Z9 1646 aa34.54■■■■□ 3.12
KHDRBS1-201ENST00000307714 DCAF8L2P0C7V8 631 aa34.46■■■■□ 3.11
KHDRBS1-201ENST00000307714 ZCCHC6Q5VYS8 1495 aaKnown RBP34.13■■■■□ 3.05
KHDRBS1-201ENST00000307714 SUPT5HO00267 1087 aaKnown RBP33.62■■■□□ 2.97
KHDRBS1-201ENST00000307714 ABCC9O60706 1549 aa33.12■■■□□ 2.89
KHDRBS1-201ENST00000307714 DCAF1Q9Y4B6 1507 aa33.06■■■□□ 2.88
KHDRBS1-201ENST00000307714 SCRIBQ14160 1630 aa32.65■■■□□ 2.82
KHDRBS1-201ENST00000307714 MYO15BQ96JP2 1530 aa32.31■■■□□ 2.76
KHDRBS1-201ENST00000307714 NACADO15069 1562 aa32.23■■■□□ 2.75
KHDRBS1-201ENST00000307714 CHIC1Q5VXU3 224 aa32.15■■■□□ 2.74
KHDRBS1-201ENST00000307714 RSF1Q96T23 1441 aaPredicted RBP31.96■■■□□ 2.71
KHDRBS1-201ENST00000307714 CECR2Q9BXF3 1484 aa31.91■■■□□ 2.7
KHDRBS1-201ENST00000307714 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
KHDRBS1-201ENST00000307714 PABPN1Q86U42 306 aaKnown RBP eCLIP31.72■■■□□ 2.67
KHDRBS1-201ENST00000307714 MROH2BQ7Z745 1585 aa31.63■■■□□ 2.65
KHDRBS1-201ENST00000307714 WIZO95785 1651 aa31.4■■■□□ 2.62
KHDRBS1-201ENST00000307714 LOC105371045A0A1W2PR82 267 aa31.39■■■□□ 2.61
KHDRBS1-201ENST00000307714 UNC13AQ9UPW8 1703 aa31.38■■■□□ 2.61
KHDRBS1-201ENST00000307714 TRIM41Q8WV44 630 aa31.21■■■□□ 2.59
KHDRBS1-201ENST00000307714 FAM9AQ8IZU1 332 aaPredicted RBP31.17■■■□□ 2.58
KHDRBS1-201ENST00000307714 BAZ1AQ9NRL2 1556 aaPredicted RBP31.16■■■□□ 2.58
KHDRBS1-201ENST00000307714 BICRAQ9NZM4 1560 aa31.12■■■□□ 2.57
KHDRBS1-201ENST00000307714 EHMT2Q96KQ7 1210 aa31.12■■■□□ 2.57
KHDRBS1-201ENST00000307714 SMARCA4P51532 1647 aa31■■■□□ 2.55
KHDRBS1-201ENST00000307714 CCDC88BA6NC98 1476 aa30.78■■■□□ 2.52
KHDRBS1-201ENST00000307714 TOP2AP11388 1531 aaKnown RBP30.75■■■□□ 2.51
KHDRBS1-201ENST00000307714 SMARCA2P51531 1590 aa30.62■■■□□ 2.49
KHDRBS1-201ENST00000307714 PCGF6Q9BYE7 350 aa30.61■■■□□ 2.49
KHDRBS1-201ENST00000307714 ABCC8Q09428 1581 aa30.56■■■□□ 2.48
KHDRBS1-201ENST00000307714 ATAD2BQ9ULI0 1458 aa30.48■■■□□ 2.47
KHDRBS1-201ENST00000307714 EIF4G1Q04637 1599 aaKnown RBP30.45■■■□□ 2.46
KHDRBS1-201ENST00000307714 BAZ1BQ9UIG0 1483 aaKnown RBP30.36■■■□□ 2.45
KHDRBS1-201ENST00000307714 PEG3Q9GZU2 1588 aa30.3■■■□□ 2.44
KHDRBS1-201ENST00000307714 SOGA1O94964 1423 aa30.18■■■□□ 2.42
KHDRBS1-201ENST00000307714 PPARGC1BQ86YN6 1023 aaKnown RBP30.18■■■□□ 2.42
KHDRBS1-201ENST00000307714 RUSC2Q8N2Y8 1516 aa30.1■■■□□ 2.41
KHDRBS1-201ENST00000307714 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
KHDRBS1-201ENST00000307714 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.38
KHDRBS1-201ENST00000307714 CSRNP3Q8WYN3 585 aa29.93■■■□□ 2.38
KHDRBS1-201ENST00000307714 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
KHDRBS1-201ENST00000307714 UBTFP17480 764 aaKnown RBP29.9■■■□□ 2.38
KHDRBS1-201ENST00000307714 HRCP23327 699 aa29.89■■■□□ 2.38
KHDRBS1-201ENST00000307714 SYNJ1O43426 1573 aa29.88■■■□□ 2.37
KHDRBS1-201ENST00000307714 TTBK1Q5TCY1 1321 aaPredicted RBP29.86■■■□□ 2.37
KHDRBS1-201ENST00000307714 RANGAP1P46060 587 aaPredicted RBP29.76■■■□□ 2.36
KHDRBS1-201ENST00000307714 HMGXB3Q12766 1538 aa29.74■■■□□ 2.35
KHDRBS1-201ENST00000307714 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
KHDRBS1-201ENST00000307714 CEP162Q5TB80 1403 aa29.61■■■□□ 2.33
KHDRBS1-201ENST00000307714 EEA1Q15075 1411 aa29.56■■■□□ 2.32
KHDRBS1-201ENST00000307714 DNAJC5BQ9UF47 199 aa29.55■■■□□ 2.32
KHDRBS1-201ENST00000307714 TNIKQ9UKE5 1360 aa29.53■■■□□ 2.32
KHDRBS1-201ENST00000307714 CFTRP13569 1480 aa29.52■■■□□ 2.32
KHDRBS1-201ENST00000307714 GOLGA3Q08378 1498 aa29.46■■■□□ 2.31
KHDRBS1-201ENST00000307714 CUX1P39880 1505 aa29.45■■■□□ 2.31
KHDRBS1-201ENST00000307714 TOP2BQ02880 1626 aa29.45■■■□□ 2.3
KHDRBS1-201ENST00000307714 CADPSQ9ULU8 1353 aa29.42■■■□□ 2.3
KHDRBS1-201ENST00000307714 RAPGEF2Q9Y4G8 1499 aa29.41■■■□□ 2.3
KHDRBS1-201ENST00000307714 CEP164Q9UPV0 1460 aa29.35■■■□□ 2.29
KHDRBS1-201ENST00000307714 NESP48681 1621 aa29.3■■■□□ 2.28
KHDRBS1-201ENST00000307714 BIVM-ERCC5R4GMW8 1640 aa29.27■■■□□ 2.28
KHDRBS1-201ENST00000307714 CLIP1P30622 1438 aa29.21■■■□□ 2.27
KHDRBS1-201ENST00000307714 KIF21BO75037 1637 aa29.18■■■□□ 2.26
KHDRBS1-201ENST00000307714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.16■■■□□ 2.26
KHDRBS1-201ENST00000307714 KIF27Q86VH2 1401 aa29.14■■■□□ 2.26
KHDRBS1-201ENST00000307714 FANCD2Q9BXW9 1451 aa29.13■■■□□ 2.25
KHDRBS1-201ENST00000307714 CUX2O14529 1486 aa29.1■■■□□ 2.25
KHDRBS1-201ENST00000307714 FGD5Q6ZNL6 1462 aa29.06■■■□□ 2.24
KHDRBS1-201ENST00000307714 PRXQ9BXM0 1461 aa29.06■■■□□ 2.24
KHDRBS1-201ENST00000307714 RAD54L2Q9Y4B4 1467 aa28.99■■■□□ 2.23
KHDRBS1-201ENST00000307714 IGF1RP08069 1367 aa28.98■■■□□ 2.23
KHDRBS1-201ENST00000307714 APLP2Q06481 763 aa28.96■■■□□ 2.23
KHDRBS1-201ENST00000307714 PRDM2Q13029 1718 aa28.94■■■□□ 2.22
KHDRBS1-201ENST00000307714 CCER1Q8TC90 406 aaPredicted RBP28.93■■■□□ 2.22
KHDRBS1-201ENST00000307714 VPS8Q8N3P4 1428 aa28.91■■■□□ 2.22
KHDRBS1-201ENST00000307714 HNRNPUL2Q1KMD3 747 aaKnown RBP28.89■■■□□ 2.22
KHDRBS1-201ENST00000307714 CARMIL1Q5VZK9 1371 aa28.85■■■□□ 2.21
KHDRBS1-201ENST00000307714 P3H3Q8IVL6 736 aa28.84■■■□□ 2.21
KHDRBS1-201ENST00000307714 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
KHDRBS1-201ENST00000307714 TOPBP1Q92547 1522 aa28.83■■■□□ 2.21
KHDRBS1-201ENST00000307714 POLA1P09884 1462 aaPredicted RBP28.8■■■□□ 2.2
KHDRBS1-201ENST00000307714 ZEB1P37275 1124 aaPredicted RBP28.8■■■□□ 2.2
KHDRBS1-201ENST00000307714 KANK4Q5T7N3 995 aaPredicted RBP28.79■■■□□ 2.2
KHDRBS1-201ENST00000307714 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
KHDRBS1-201ENST00000307714 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
KHDRBS1-201ENST00000307714 URB2Q14146 1524 aaKnown RBP28.74■■■□□ 2.19
KHDRBS1-201ENST00000307714 DNMBPQ6XZF7 1577 aa28.72■■■□□ 2.19
KHDRBS1-201ENST00000307714 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
KHDRBS1-201ENST00000307714 ATP1B4Q9UN42 357 aaPredicted RBP28.67■■■□□ 2.18
KHDRBS1-201ENST00000307714 ARHGAP35Q9NRY4 1499 aa28.66■■■□□ 2.18
KHDRBS1-201ENST00000307714 PDS5BQ9NTI5 1447 aa28.66■■■□□ 2.18
KHDRBS1-201ENST00000307714 ABCA10Q8WWZ4 1543 aa28.59■■■□□ 2.17
KHDRBS1-201ENST00000307714 KIF21AQ7Z4S6 1674 aa28.55■■■□□ 2.16
KHDRBS1-201ENST00000307714 ITGAEP38570 1179 aa28.49■■■□□ 2.15
KHDRBS1-201ENST00000307714 FHOD3Q2V2M9 1422 aa28.4■■■□□ 2.14
KHDRBS1-201ENST00000307714 GAPVD1Q14C86 1478 aa28.4■■■□□ 2.14
KHDRBS1-201ENST00000307714 AQRO60306 1485 aaKnown RBP eCLIP28.39■■■□□ 2.146e-7■■■■□ 24.5
KHDRBS1-201ENST00000307714 WDR97A6NE52 1622 aa28.24■■■□□ 2.11
KHDRBS1-201ENST00000307714 MRC2Q9UBG0 1479 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms