Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00308Q8TCZ7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00308Q8TCZ7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00308Q8TCZ7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00308Q8TCZ7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LINC00308Q8TCZ7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LINC00308Q8TCZ7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00308Q8TCZ7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00308Q8TCZ7 MIR219A2-201ENST00000608502 1504 ntBASIC15.3■□□□□ 0.04
LINC00308Q8TCZ7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LINC00308Q8TCZ7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00308Q8TCZ7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 DUSP8P3-201ENST00000399571 1760 ntBASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC00308Q8TCZ7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
LINC00308Q8TCZ7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LINC00308Q8TCZ7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00308Q8TCZ7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00308Q8TCZ7 FOXO3B-201ENST00000395675 1928 ntBASIC15.27■□□□□ 0.04
LINC00308Q8TCZ7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00308Q8TCZ7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00308Q8TCZ7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00308Q8TCZ7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00308Q8TCZ7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC15.27■□□□□ 0.04
LINC00308Q8TCZ7 MIR3665-201ENST00000578708 105 ntBASIC15.27■□□□□ 0.04
LINC00308Q8TCZ7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00308Q8TCZ7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 AC148477.6-201ENST00000623746 465 ntBASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 AC092068.2-201ENST00000590491 1708 ntBASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00308Q8TCZ7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 AC008813.1-201ENST00000536597 885 ntBASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00308Q8TCZ7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LINC00308Q8TCZ7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms