Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ALMS1Q8TCU4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ALMS1Q8TCU4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 AL358852.1-201ENST00000623174 1268 ntBASIC15.78■□□□□ 0.12
ALMS1Q8TCU4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC15.77■□□□□ 0.12
ALMS1Q8TCU4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC15.77■□□□□ 0.12
ALMS1Q8TCU4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
ALMS1Q8TCU4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ALMS1Q8TCU4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ALMS1Q8TCU4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ALMS1Q8TCU4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
ALMS1Q8TCU4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.77■□□□□ 0.12
ALMS1Q8TCU4 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.77■□□□□ 0.12
ALMS1Q8TCU4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ALMS1Q8TCU4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ALMS1Q8TCU4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
ALMS1Q8TCU4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ALMS1Q8TCU4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC15.77■□□□□ 0.11
ALMS1Q8TCU4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 TERF1P2-201ENST00000583350 1212 ntBASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 BX842568.3-201ENST00000418104 571 ntBASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.76■□□□□ 0.11
ALMS1Q8TCU4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.75■□□□□ 0.11
ALMS1Q8TCU4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
ALMS1Q8TCU4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.75■□□□□ 0.11
ALMS1Q8TCU4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.75■□□□□ 0.11
ALMS1Q8TCU4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ALMS1Q8TCU4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ALMS1Q8TCU4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC15.75■□□□□ 0.11
ALMS1Q8TCU4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.75■□□□□ 0.11
ALMS1Q8TCU4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALMS1Q8TCU4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ALMS1Q8TCU4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALMS1Q8TCU4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.74■□□□□ 0.11
ALMS1Q8TCU4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.74■□□□□ 0.11
ALMS1Q8TCU4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.74■□□□□ 0.11
ALMS1Q8TCU4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALMS1Q8TCU4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.74■□□□□ 0.11
ALMS1Q8TCU4 KRT18P14-201ENST00000534205 1250 ntBASIC15.74■□□□□ 0.11
ALMS1Q8TCU4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.74■□□□□ 0.11
ALMS1Q8TCU4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 AC096887.2-201ENST00000623443 1957 ntBASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 CDCA4P2-201ENST00000441182 718 ntBASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 MIR3181-201ENST00000578512 73 ntBASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.73■□□□□ 0.11
ALMS1Q8TCU4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ALMS1Q8TCU4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.72■□□□□ 0.11
ALMS1Q8TCU4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.72■□□□□ 0.11
ALMS1Q8TCU4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ALMS1Q8TCU4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ALMS1Q8TCU4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.72■□□□□ 0.11
ALMS1Q8TCU4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms