Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.65■□□□□ 0.9
FNDC9Q8TBE3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FNDC9Q8TBE3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FNDC9Q8TBE3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.65■□□□□ 0.9
FNDC9Q8TBE3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.65■□□□□ 0.9
FNDC9Q8TBE3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FNDC9Q8TBE3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FNDC9Q8TBE3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FNDC9Q8TBE3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FNDC9Q8TBE3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FNDC9Q8TBE3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FNDC9Q8TBE3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.64■□□□□ 0.9
FNDC9Q8TBE3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
FNDC9Q8TBE3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.64■□□□□ 0.89
FNDC9Q8TBE3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.64■□□□□ 0.89
FNDC9Q8TBE3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
FNDC9Q8TBE3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FNDC9Q8TBE3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
FNDC9Q8TBE3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FNDC9Q8TBE3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.63■□□□□ 0.89
FNDC9Q8TBE3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.63■□□□□ 0.89
FNDC9Q8TBE3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.63■□□□□ 0.89
FNDC9Q8TBE3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FNDC9Q8TBE3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.63■□□□□ 0.89
FNDC9Q8TBE3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 MIR6724-1-201ENST00000616420 92 ntBASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 MIR6724-2-201ENST00000616483 92 ntBASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 MIR6724-4-201ENST00000617390 92 ntBASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 MIR6724-3-201ENST00000622482 92 ntBASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 HLA-L-211ENST00000482052 1765 ntBASIC20.62■□□□□ 0.89
FNDC9Q8TBE3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 AC004448.1-201ENST00000458332 883 ntBASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FNDC9Q8TBE3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 AC131274.2-201ENST00000580697 1507 ntBASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 AC138932.3-201ENST00000567634 1902 ntBASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 AC142381.3-201ENST00000568208 1670 ntBASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.6■□□□□ 0.89
FNDC9Q8TBE3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.59■□□□□ 0.89
FNDC9Q8TBE3 AP003733.4-201ENST00000623785 1697 ntBASIC20.59■□□□□ 0.89
FNDC9Q8TBE3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FNDC9Q8TBE3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.59■□□□□ 0.89
FNDC9Q8TBE3 MIR6722-201ENST00000617286 78 ntBASIC20.59■□□□□ 0.89
FNDC9Q8TBE3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
FNDC9Q8TBE3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.59■□□□□ 0.89
FNDC9Q8TBE3 AC093323.1-202ENST00000635031 2045 ntBASIC20.59■□□□□ 0.89
FNDC9Q8TBE3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.59■□□□□ 0.89
FNDC9Q8TBE3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FNDC9Q8TBE3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FNDC9Q8TBE3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FNDC9Q8TBE3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.58■□□□□ 0.89
FNDC9Q8TBE3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.58■□□□□ 0.89
FNDC9Q8TBE3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.58■□□□□ 0.89
FNDC9Q8TBE3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
FNDC9Q8TBE3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.58■□□□□ 0.88
FNDC9Q8TBE3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
FNDC9Q8TBE3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 AL117332.1-201ENST00000622628 974 ntBASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC9Q8TBE3 AL022069.1-201ENST00000568025 1636 ntBASIC20.56■□□□□ 0.88
FNDC9Q8TBE3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC9Q8TBE3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC9Q8TBE3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC9Q8TBE3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms