Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PRPF38AQ8NAV1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PRPF38AQ8NAV1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF38AQ8NAV1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF38AQ8NAV1 SRD5A1P1-201ENST00000442297 786 ntBASIC26.65■■□□□ 1.86
PRPF38AQ8NAV1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.65■■□□□ 1.86
PRPF38AQ8NAV1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
PRPF38AQ8NAV1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF38AQ8NAV1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF38AQ8NAV1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
PRPF38AQ8NAV1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.65■■□□□ 1.86
PRPF38AQ8NAV1 AL022069.1-201ENST00000568025 1636 ntBASIC26.65■■□□□ 1.86
PRPF38AQ8NAV1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.65■■□□□ 1.86
PRPF38AQ8NAV1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
PRPF38AQ8NAV1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PRPF38AQ8NAV1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PRPF38AQ8NAV1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PRPF38AQ8NAV1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PRPF38AQ8NAV1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.63■■□□□ 1.85
PRPF38AQ8NAV1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PRPF38AQ8NAV1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PRPF38AQ8NAV1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.62■■□□□ 1.85
PRPF38AQ8NAV1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PRPF38AQ8NAV1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.62■■□□□ 1.85
PRPF38AQ8NAV1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.62■■□□□ 1.85
PRPF38AQ8NAV1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
PRPF38AQ8NAV1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.62■■□□□ 1.85
PRPF38AQ8NAV1 AC106739.1-201ENST00000617035 715 ntBASIC26.62■■□□□ 1.85
PRPF38AQ8NAV1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.62■■□□□ 1.85
PRPF38AQ8NAV1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PRPF38AQ8NAV1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRPF38AQ8NAV1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PRPF38AQ8NAV1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRPF38AQ8NAV1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRPF38AQ8NAV1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
PRPF38AQ8NAV1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PRPF38AQ8NAV1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PRPF38AQ8NAV1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
PRPF38AQ8NAV1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PRPF38AQ8NAV1 UNC93B3-201ENST00000308076 687 ntBASIC26.6■■□□□ 1.85
PRPF38AQ8NAV1 PBX2P1-201ENST00000493219 1291 ntBASIC26.6■■□□□ 1.85
PRPF38AQ8NAV1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
PRPF38AQ8NAV1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PRPF38AQ8NAV1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PRPF38AQ8NAV1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF38AQ8NAV1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF38AQ8NAV1 MIR935-201ENST00000401179 91 ntBASIC26.59■■□□□ 1.85
PRPF38AQ8NAV1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF38AQ8NAV1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF38AQ8NAV1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF38AQ8NAV1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF38AQ8NAV1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF38AQ8NAV1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF38AQ8NAV1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
PRPF38AQ8NAV1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRPF38AQ8NAV1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRPF38AQ8NAV1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.58■■□□□ 1.85
PRPF38AQ8NAV1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
PRPF38AQ8NAV1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.57■■□□□ 1.84
PRPF38AQ8NAV1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PRPF38AQ8NAV1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
PRPF38AQ8NAV1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.55■■□□□ 1.84
PRPF38AQ8NAV1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRPF38AQ8NAV1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.55■■□□□ 1.84
PRPF38AQ8NAV1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
PRPF38AQ8NAV1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.55■■□□□ 1.84
PRPF38AQ8NAV1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
PRPF38AQ8NAV1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRPF38AQ8NAV1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRPF38AQ8NAV1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.54■■□□□ 1.84
PRPF38AQ8NAV1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PRPF38AQ8NAV1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.54■■□□□ 1.84
PRPF38AQ8NAV1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PRPF38AQ8NAV1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.54■■□□□ 1.84
PRPF38AQ8NAV1 AL136162.1-201ENST00000607711 1078 ntBASIC26.54■■□□□ 1.84
PRPF38AQ8NAV1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.54■■□□□ 1.84
PRPF38AQ8NAV1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.54■■□□□ 1.84
PRPF38AQ8NAV1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.54■■□□□ 1.84
PRPF38AQ8NAV1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 1559.1 ms