Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23■■□□□ 1.27
TMEFF1Q8IYR6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TMEFF1Q8IYR6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23■■□□□ 1.27
TMEFF1Q8IYR6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23■■□□□ 1.27
TMEFF1Q8IYR6 MAG-206ENST00000597035 542 ntTSL 4 BASIC23■■□□□ 1.27
TMEFF1Q8IYR6 AC092171.4-201ENST00000609130 632 ntBASIC23■■□□□ 1.27
TMEFF1Q8IYR6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23■■□□□ 1.27
TMEFF1Q8IYR6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23■■□□□ 1.27
TMEFF1Q8IYR6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TMEFF1Q8IYR6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23■■□□□ 1.27
TMEFF1Q8IYR6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TMEFF1Q8IYR6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TMEFF1Q8IYR6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
TMEFF1Q8IYR6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.99■■□□□ 1.27
TMEFF1Q8IYR6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.99■■□□□ 1.27
TMEFF1Q8IYR6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.99■■□□□ 1.27
TMEFF1Q8IYR6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TMEFF1Q8IYR6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.98■■□□□ 1.27
TMEFF1Q8IYR6 SERBP1P1-201ENST00000396021 1160 ntBASIC22.98■■□□□ 1.27
TMEFF1Q8IYR6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.98■■□□□ 1.27
TMEFF1Q8IYR6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.98■■□□□ 1.27
TMEFF1Q8IYR6 MIR6821-201ENST00000617625 74 ntBASIC22.98■■□□□ 1.27
TMEFF1Q8IYR6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TMEFF1Q8IYR6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.98■■□□□ 1.27
TMEFF1Q8IYR6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 AC099791.2-201ENST00000605725 427 ntBASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 CA15P2-201ENST00000611168 834 ntBASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 AC010501.1-201ENST00000606270 1962 ntBASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEFF1Q8IYR6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.96■■□□□ 1.27
TMEFF1Q8IYR6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
TMEFF1Q8IYR6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TMEFF1Q8IYR6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.96■■□□□ 1.27
TMEFF1Q8IYR6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.95■■□□□ 1.26
TMEFF1Q8IYR6 RASA4CP-201ENST00000424092 1398 ntBASIC22.95■■□□□ 1.26
TMEFF1Q8IYR6 AC097381.1-201ENST00000429019 1296 ntBASIC22.95■■□□□ 1.26
TMEFF1Q8IYR6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.95■■□□□ 1.26
TMEFF1Q8IYR6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
TMEFF1Q8IYR6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.95■■□□□ 1.26
TMEFF1Q8IYR6 AC087623.3-201ENST00000607047 1098 ntBASIC22.95■■□□□ 1.26
TMEFF1Q8IYR6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TMEFF1Q8IYR6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TMEFF1Q8IYR6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
TMEFF1Q8IYR6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.94■■□□□ 1.26
TMEFF1Q8IYR6 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.94■■□□□ 1.26
TMEFF1Q8IYR6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TMEFF1Q8IYR6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
TMEFF1Q8IYR6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
TMEFF1Q8IYR6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TMEFF1Q8IYR6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TMEFF1Q8IYR6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.93■■□□□ 1.26
TMEFF1Q8IYR6 AC008764.7-201ENST00000593779 1081 ntBASIC22.93■■□□□ 1.26
TMEFF1Q8IYR6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TMEFF1Q8IYR6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TMEFF1Q8IYR6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
TMEFF1Q8IYR6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.92■■□□□ 1.26
TMEFF1Q8IYR6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.92■■□□□ 1.26
TMEFF1Q8IYR6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEFF1Q8IYR6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEFF1Q8IYR6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
TMEFF1Q8IYR6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
TMEFF1Q8IYR6 AC131274.2-201ENST00000580697 1507 ntBASIC22.92■■□□□ 1.26
TMEFF1Q8IYR6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
TMEFF1Q8IYR6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.91■■□□□ 1.26
TMEFF1Q8IYR6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.91■■□□□ 1.26
TMEFF1Q8IYR6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TMEFF1Q8IYR6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TMEFF1Q8IYR6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TMEFF1Q8IYR6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TMEFF1Q8IYR6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
TMEFF1Q8IYR6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
TMEFF1Q8IYR6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TMEFF1Q8IYR6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEFF1Q8IYR6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TMEFF1Q8IYR6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
TMEFF1Q8IYR6 AL162430.1-201ENST00000480705 870 ntBASIC22.9■■□□□ 1.26
TMEFF1Q8IYR6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.9■■□□□ 1.26
TMEFF1Q8IYR6 AC027682.1-201ENST00000562846 899 ntBASIC22.9■■□□□ 1.26
TMEFF1Q8IYR6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TMEFF1Q8IYR6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEFF1Q8IYR6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.9■■□□□ 1.26
TMEFF1Q8IYR6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TMEFF1Q8IYR6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.89■■□□□ 1.25
TMEFF1Q8IYR6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TMEFF1Q8IYR6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms