Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABRR1P24046 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABRR1P24046 AC087393.1-201ENST00000582896 145 ntBASIC19.66■□□□□ 0.74
GABRR1P24046 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABRR1P24046 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABRR1P24046 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABRR1P24046 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABRR1P24046 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABRR1P24046 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABRR1P24046 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABRR1P24046 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABRR1P24046 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABRR1P24046 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.65■□□□□ 0.74
GABRR1P24046 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.65■□□□□ 0.74
GABRR1P24046 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABRR1P24046 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABRR1P24046 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABRR1P24046 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABRR1P24046 AC012676.1-201ENST00000574705 1949 ntBASIC19.64■□□□□ 0.74
GABRR1P24046 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.64■□□□□ 0.74
GABRR1P24046 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GABRR1P24046 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABRR1P24046 DUX4L18-201ENST00000553347 1267 ntBASIC19.64■□□□□ 0.73
GABRR1P24046 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.64■□□□□ 0.73
GABRR1P24046 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.64■□□□□ 0.73
GABRR1P24046 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABRR1P24046 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABRR1P24046 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GABRR1P24046 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GABRR1P24046 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GABRR1P24046 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GABRR1P24046 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
GABRR1P24046 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
GABRR1P24046 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GABRR1P24046 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
GABRR1P24046 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GABRR1P24046 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
GABRR1P24046 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GABRR1P24046 AC139795.1-202ENST00000500444 432 ntBASIC19.62■□□□□ 0.73
GABRR1P24046 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
GABRR1P24046 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.62■□□□□ 0.73
GABRR1P24046 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.62■□□□□ 0.73
GABRR1P24046 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
GABRR1P24046 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.62■□□□□ 0.73
GABRR1P24046 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GABRR1P24046 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GABRR1P24046 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
GABRR1P24046 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
GABRR1P24046 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.61■□□□□ 0.73
GABRR1P24046 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GABRR1P24046 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GABRR1P24046 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.61■□□□□ 0.73
GABRR1P24046 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GABRR1P24046 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABRR1P24046 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABRR1P24046 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.6■□□□□ 0.73
GABRR1P24046 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABRR1P24046 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABRR1P24046 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABRR1P24046 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.6■□□□□ 0.73
GABRR1P24046 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
GABRR1P24046 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.6■□□□□ 0.73
GABRR1P24046 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABRR1P24046 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABRR1P24046 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
GABRR1P24046 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
GABRR1P24046 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GABRR1P24046 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GABRR1P24046 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.59■□□□□ 0.73
GABRR1P24046 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.59■□□□□ 0.73
GABRR1P24046 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GABRR1P24046 BHLHE23-202ENST00000612929 1109 ntBASIC19.59■□□□□ 0.73
GABRR1P24046 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GABRR1P24046 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GABRR1P24046 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GABRR1P24046 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GABRR1P24046 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.59■□□□□ 0.73
GABRR1P24046 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.59■□□□□ 0.73
GABRR1P24046 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GABRR1P24046 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.58■□□□□ 0.73
GABRR1P24046 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
GABRR1P24046 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GABRR1P24046 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GABRR1P24046 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GABRR1P24046 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABRR1P24046 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABRR1P24046 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
GABRR1P24046 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABRR1P24046 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABRR1P24046 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.58■□□□□ 0.72
GABRR1P24046 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GABRR1P24046 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
GABRR1P24046 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABRR1P24046 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABRR1P24046 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GABRR1P24046 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.57■□□□□ 0.72
GABRR1P24046 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GABRR1P24046 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GABRR1P24046 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.57■□□□□ 0.72
GABRR1P24046 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms