Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT4O95628 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT4O95628 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT4O95628 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.35■□□□□ 0.85
CNOT4O95628 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.35■□□□□ 0.85
CNOT4O95628 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT4O95628 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT4O95628 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT4O95628 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT4O95628 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.34■□□□□ 0.85
CNOT4O95628 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT4O95628 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT4O95628 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT4O95628 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.34■□□□□ 0.85
CNOT4O95628 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CNOT4O95628 AL022069.1-201ENST00000568025 1636 ntBASIC20.34■□□□□ 0.85
CNOT4O95628 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT4O95628 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT4O95628 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.33■□□□□ 0.85
CNOT4O95628 MIR6724-1-201ENST00000616420 92 ntBASIC20.33■□□□□ 0.85
CNOT4O95628 MIR6724-2-201ENST00000616483 92 ntBASIC20.33■□□□□ 0.85
CNOT4O95628 MIR6724-4-201ENST00000617390 92 ntBASIC20.33■□□□□ 0.85
CNOT4O95628 MIR6724-3-201ENST00000622482 92 ntBASIC20.33■□□□□ 0.85
CNOT4O95628 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNOT4O95628 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.33■□□□□ 0.84
CNOT4O95628 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNOT4O95628 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNOT4O95628 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNOT4O95628 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT4O95628 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT4O95628 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.32■□□□□ 0.84
CNOT4O95628 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT4O95628 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT4O95628 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.32■□□□□ 0.84
CNOT4O95628 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT4O95628 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.31■□□□□ 0.84
CNOT4O95628 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT4O95628 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT4O95628 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT4O95628 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.31■□□□□ 0.84
CNOT4O95628 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT4O95628 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT4O95628 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CNOT4O95628 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT4O95628 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT4O95628 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT4O95628 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT4O95628 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT4O95628 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.3■□□□□ 0.84
CNOT4O95628 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CNOT4O95628 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.3■□□□□ 0.84
CNOT4O95628 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.3■□□□□ 0.84
CNOT4O95628 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT4O95628 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT4O95628 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT4O95628 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CNOT4O95628 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT4O95628 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CNOT4O95628 AC131274.2-201ENST00000580697 1507 ntBASIC20.29■□□□□ 0.84
CNOT4O95628 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT4O95628 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT4O95628 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT4O95628 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.29■□□□□ 0.84
CNOT4O95628 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.29■□□□□ 0.84
CNOT4O95628 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT4O95628 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT4O95628 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT4O95628 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.28■□□□□ 0.84
CNOT4O95628 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.28■□□□□ 0.84
CNOT4O95628 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.28■□□□□ 0.84
CNOT4O95628 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.28■□□□□ 0.84
CNOT4O95628 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.28■□□□□ 0.84
CNOT4O95628 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CNOT4O95628 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT4O95628 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT4O95628 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT4O95628 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.27■□□□□ 0.84
CNOT4O95628 HLA-L-211ENST00000482052 1765 ntBASIC20.27■□□□□ 0.84
CNOT4O95628 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.27■□□□□ 0.84
CNOT4O95628 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.27■□□□□ 0.84
CNOT4O95628 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT4O95628 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT4O95628 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.27■□□□□ 0.84
CNOT4O95628 AC020928.2-201ENST00000588717 2197 ntBASIC20.27■□□□□ 0.83
CNOT4O95628 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT4O95628 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT4O95628 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CNOT4O95628 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT4O95628 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT4O95628 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.26■□□□□ 0.83
CNOT4O95628 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT4O95628 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT4O95628 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CNOT4O95628 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.25■□□□□ 0.83
CNOT4O95628 MIR638-201ENST00000385237 100 ntBASIC20.25■□□□□ 0.83
CNOT4O95628 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT4O95628 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.25■□□□□ 0.83
CNOT4O95628 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.25■□□□□ 0.83
CNOT4O95628 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT4O95628 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms