Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF254O75437 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF254O75437 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF254O75437 MIR6765-201ENST00000614092 87 ntBASIC20.28■□□□□ 0.84
ZNF254O75437 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF254O75437 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF254O75437 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF254O75437 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF254O75437 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF254O75437 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.27■□□□□ 0.84
ZNF254O75437 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF254O75437 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF254O75437 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF254O75437 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF254O75437 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF254O75437 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZNF254O75437 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF254O75437 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF254O75437 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF254O75437 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ZNF254O75437 SPCS2P3-201ENST00000500401 656 ntBASIC20.26■□□□□ 0.83
ZNF254O75437 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF254O75437 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF254O75437 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF254O75437 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF254O75437 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF254O75437 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF254O75437 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF254O75437 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF254O75437 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF254O75437 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF254O75437 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF254O75437 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF254O75437 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF254O75437 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF254O75437 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF254O75437 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF254O75437 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.25■□□□□ 0.83
ZNF254O75437 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF254O75437 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
ZNF254O75437 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF254O75437 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF254O75437 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ZNF254O75437 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ZNF254O75437 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF254O75437 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF254O75437 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF254O75437 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ZNF254O75437 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF254O75437 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF254O75437 AC079834.2-201ENST00000609776 1949 ntBASIC20.24■□□□□ 0.83
ZNF254O75437 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF254O75437 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.24■□□□□ 0.83
ZNF254O75437 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF254O75437 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
ZNF254O75437 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ZNF254O75437 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF254O75437 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF254O75437 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF254O75437 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
ZNF254O75437 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF254O75437 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF254O75437 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF254O75437 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF254O75437 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF254O75437 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF254O75437 DUX4L9-201ENST00000449051 1259 ntBASIC20.22■□□□□ 0.83
ZNF254O75437 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
ZNF254O75437 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF254O75437 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF254O75437 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF254O75437 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF254O75437 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
ZNF254O75437 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF254O75437 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF254O75437 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF254O75437 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
ZNF254O75437 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF254O75437 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ZNF254O75437 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF254O75437 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF254O75437 CLDN5-201ENST00000403084 2357 ntBASIC20.21■□□□□ 0.83
ZNF254O75437 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ZNF254O75437 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF254O75437 RARRES2P2-201ENST00000394842 485 ntBASIC20.2■□□□□ 0.82
ZNF254O75437 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.2■□□□□ 0.82
ZNF254O75437 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.2■□□□□ 0.82
ZNF254O75437 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF254O75437 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF254O75437 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF254O75437 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ZNF254O75437 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF254O75437 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF254O75437 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF254O75437 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF254O75437 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF254O75437 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF254O75437 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF254O75437 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF254O75437 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms