Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.93■■□□□ 1.9
EFCC1Q9HA90 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.93■■□□□ 1.9
EFCC1Q9HA90 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.93■■□□□ 1.9
EFCC1Q9HA90 CA15P2-201ENST00000611168 834 ntBASIC26.93■■□□□ 1.9
EFCC1Q9HA90 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.93■■□□□ 1.9
EFCC1Q9HA90 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
EFCC1Q9HA90 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.93■■□□□ 1.9
EFCC1Q9HA90 AC090877.2-201ENST00000558441 1738 ntBASIC26.93■■□□□ 1.9
EFCC1Q9HA90 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.92■■□□□ 1.9
EFCC1Q9HA90 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.92■■□□□ 1.9
EFCC1Q9HA90 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.92■■□□□ 1.9
EFCC1Q9HA90 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.92■■□□□ 1.9
EFCC1Q9HA90 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
EFCC1Q9HA90 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
EFCC1Q9HA90 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.92■■□□□ 1.9
EFCC1Q9HA90 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.91■■□□□ 1.9
EFCC1Q9HA90 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
EFCC1Q9HA90 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
EFCC1Q9HA90 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
EFCC1Q9HA90 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.91■■□□□ 1.9
EFCC1Q9HA90 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
EFCC1Q9HA90 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
EFCC1Q9HA90 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
EFCC1Q9HA90 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
EFCC1Q9HA90 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
EFCC1Q9HA90 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
EFCC1Q9HA90 RASA4CP-201ENST00000424092 1398 ntBASIC26.9■■□□□ 1.9
EFCC1Q9HA90 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
EFCC1Q9HA90 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.9■■□□□ 1.9
EFCC1Q9HA90 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.9■■□□□ 1.9
EFCC1Q9HA90 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.9■■□□□ 1.9
EFCC1Q9HA90 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
EFCC1Q9HA90 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
EFCC1Q9HA90 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.89■■□□□ 1.9
EFCC1Q9HA90 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.89■■□□□ 1.89
EFCC1Q9HA90 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
EFCC1Q9HA90 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
EFCC1Q9HA90 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
EFCC1Q9HA90 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
EFCC1Q9HA90 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
EFCC1Q9HA90 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
EFCC1Q9HA90 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
EFCC1Q9HA90 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.88■■□□□ 1.89
EFCC1Q9HA90 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
EFCC1Q9HA90 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.88■■□□□ 1.89
EFCC1Q9HA90 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
EFCC1Q9HA90 MIR4767-201ENST00000582827 78 ntBASIC26.88■■□□□ 1.89
EFCC1Q9HA90 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.88■■□□□ 1.89
EFCC1Q9HA90 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
EFCC1Q9HA90 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
EFCC1Q9HA90 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
EFCC1Q9HA90 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
EFCC1Q9HA90 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
EFCC1Q9HA90 SYT6-210ENST00000641643 1587 ntBASIC26.87■■□□□ 1.89
EFCC1Q9HA90 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
EFCC1Q9HA90 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
EFCC1Q9HA90 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.86■■□□□ 1.89
EFCC1Q9HA90 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.86■■□□□ 1.89
EFCC1Q9HA90 IRS3P-201ENST00000223076 1006 ntBASIC26.86■■□□□ 1.89
EFCC1Q9HA90 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
EFCC1Q9HA90 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
EFCC1Q9HA90 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
EFCC1Q9HA90 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
EFCC1Q9HA90 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
EFCC1Q9HA90 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.86■■□□□ 1.89
EFCC1Q9HA90 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.86■■□□□ 1.89
EFCC1Q9HA90 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
EFCC1Q9HA90 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
EFCC1Q9HA90 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
EFCC1Q9HA90 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
EFCC1Q9HA90 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
EFCC1Q9HA90 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.84■■□□□ 1.89
EFCC1Q9HA90 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.84■■□□□ 1.89
EFCC1Q9HA90 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.84■■□□□ 1.89
EFCC1Q9HA90 AC096887.2-201ENST00000623443 1957 ntBASIC26.84■■□□□ 1.89
EFCC1Q9HA90 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
EFCC1Q9HA90 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
EFCC1Q9HA90 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.83■■□□□ 1.89
EFCC1Q9HA90 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.83■■□□□ 1.89
EFCC1Q9HA90 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
EFCC1Q9HA90 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
EFCC1Q9HA90 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.82■■□□□ 1.88
EFCC1Q9HA90 ERN1-208ENST00000606895 2068 ntBASIC26.82■■□□□ 1.88
EFCC1Q9HA90 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
EFCC1Q9HA90 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.82■■□□□ 1.88
EFCC1Q9HA90 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.82■■□□□ 1.88
EFCC1Q9HA90 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.82■■□□□ 1.88
EFCC1Q9HA90 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.82■■□□□ 1.88
EFCC1Q9HA90 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
EFCC1Q9HA90 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.81■■□□□ 1.88
EFCC1Q9HA90 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.81■■□□□ 1.88
EFCC1Q9HA90 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
EFCC1Q9HA90 AC027682.1-201ENST00000562846 899 ntBASIC26.81■■□□□ 1.88
EFCC1Q9HA90 AC092171.4-201ENST00000609130 632 ntBASIC26.81■■□□□ 1.88
EFCC1Q9HA90 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.81■■□□□ 1.88
EFCC1Q9HA90 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
EFCC1Q9HA90 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
EFCC1Q9HA90 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.8■■□□□ 1.88
EFCC1Q9HA90 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
EFCC1Q9HA90 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms