Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VCX3BQ9H321 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VCX3BQ9H321 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VCX3BQ9H321 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
VCX3BQ9H321 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VCX3BQ9H321 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
VCX3BQ9H321 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
VCX3BQ9H321 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VCX3BQ9H321 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VCX3BQ9H321 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
VCX3BQ9H321 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VCX3BQ9H321 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
VCX3BQ9H321 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VCX3BQ9H321 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VCX3BQ9H321 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.96■■□□□ 1.11
VCX3BQ9H321 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VCX3BQ9H321 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.96■■□□□ 1.11
VCX3BQ9H321 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
VCX3BQ9H321 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
VCX3BQ9H321 RARRES2P7-201ENST00000567349 469 ntBASIC21.95■■□□□ 1.1
VCX3BQ9H321 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.95■■□□□ 1.1
VCX3BQ9H321 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VCX3BQ9H321 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VCX3BQ9H321 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VCX3BQ9H321 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
VCX3BQ9H321 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.94■■□□□ 1.1
VCX3BQ9H321 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VCX3BQ9H321 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
VCX3BQ9H321 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
VCX3BQ9H321 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VCX3BQ9H321 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VCX3BQ9H321 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VCX3BQ9H321 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.93■■□□□ 1.1
VCX3BQ9H321 MIR762-201ENST00000390236 83 ntBASIC21.93■■□□□ 1.1
VCX3BQ9H321 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.93■■□□□ 1.1
VCX3BQ9H321 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VCX3BQ9H321 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
VCX3BQ9H321 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.93■■□□□ 1.1
VCX3BQ9H321 GUSBP5-202ENST00000510805 1989 ntBASIC21.93■■□□□ 1.1
VCX3BQ9H321 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
VCX3BQ9H321 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
VCX3BQ9H321 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
VCX3BQ9H321 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VCX3BQ9H321 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VCX3BQ9H321 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.92■■□□□ 1.1
VCX3BQ9H321 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.92■■□□□ 1.1
VCX3BQ9H321 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
VCX3BQ9H321 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VCX3BQ9H321 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VCX3BQ9H321 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
VCX3BQ9H321 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.92■■□□□ 1.1
VCX3BQ9H321 MIR6089-201ENST00000616698 64 ntBASIC21.92■■□□□ 1.1
VCX3BQ9H321 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VCX3BQ9H321 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VCX3BQ9H321 ECEL1P1-201ENST00000373592 1742 ntBASIC21.92■■□□□ 1.1
VCX3BQ9H321 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
VCX3BQ9H321 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VCX3BQ9H321 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VCX3BQ9H321 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VCX3BQ9H321 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VCX3BQ9H321 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
VCX3BQ9H321 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VCX3BQ9H321 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.91■■□□□ 1.1
VCX3BQ9H321 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.91■■□□□ 1.1
VCX3BQ9H321 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCX3BQ9H321 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCX3BQ9H321 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
VCX3BQ9H321 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCX3BQ9H321 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
VCX3BQ9H321 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCX3BQ9H321 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCX3BQ9H321 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCX3BQ9H321 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VCX3BQ9H321 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.89■■□□□ 1.1
VCX3BQ9H321 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.89■■□□□ 1.1
VCX3BQ9H321 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VCX3BQ9H321 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
VCX3BQ9H321 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VCX3BQ9H321 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.89■■□□□ 1.09
VCX3BQ9H321 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.89■■□□□ 1.09
VCX3BQ9H321 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.89■■□□□ 1.09
VCX3BQ9H321 MIR6090-201ENST00000622481 60 ntBASIC21.89■■□□□ 1.09
VCX3BQ9H321 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VCX3BQ9H321 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VCX3BQ9H321 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VCX3BQ9H321 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VCX3BQ9H321 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VCX3BQ9H321 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCX3BQ9H321 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VCX3BQ9H321 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCX3BQ9H321 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.88■■□□□ 1.09
VCX3BQ9H321 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VCX3BQ9H321 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.88■■□□□ 1.09
VCX3BQ9H321 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCX3BQ9H321 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
VCX3BQ9H321 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VCX3BQ9H321 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.88■■□□□ 1.09
VCX3BQ9H321 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCX3BQ9H321 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
VCX3BQ9H321 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms