Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SMOQ99835 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SMOQ99835 KRT16P3-201ENST00000439127 1283 ntBASIC24.41■■□□□ 1.5
SMOQ99835 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMOQ99835 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMOQ99835 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMOQ99835 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMOQ99835 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMOQ99835 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.4■■□□□ 1.5
SMOQ99835 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SMOQ99835 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SMOQ99835 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SMOQ99835 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.39■■□□□ 1.5
SMOQ99835 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.39■■□□□ 1.5
SMOQ99835 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.39■■□□□ 1.5
SMOQ99835 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
SMOQ99835 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.39■■□□□ 1.49
SMOQ99835 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMOQ99835 AC010997.5-201ENST00000609182 354 ntBASIC24.39■■□□□ 1.49
SMOQ99835 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMOQ99835 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMOQ99835 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMOQ99835 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SMOQ99835 AC004448.1-201ENST00000458332 883 ntBASIC24.38■■□□□ 1.49
SMOQ99835 MTDHP2-201ENST00000601468 714 ntBASIC24.38■■□□□ 1.49
SMOQ99835 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMOQ99835 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMOQ99835 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMOQ99835 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMOQ99835 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMOQ99835 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMOQ99835 AC135731.1-201ENST00000569415 2548 ntBASIC24.36■■□□□ 1.49
SMOQ99835 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMOQ99835 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.36■■□□□ 1.49
SMOQ99835 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SMOQ99835 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SMOQ99835 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMOQ99835 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMOQ99835 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.35■■□□□ 1.49
SMOQ99835 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMOQ99835 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMOQ99835 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.35■■□□□ 1.49
SMOQ99835 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SMOQ99835 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.35■■□□□ 1.49
SMOQ99835 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.35■■□□□ 1.49
SMOQ99835 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.35■■□□□ 1.49
SMOQ99835 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMOQ99835 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SMOQ99835 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.35■■□□□ 1.49
SMOQ99835 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SMOQ99835 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.35■■□□□ 1.49
SMOQ99835 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMOQ99835 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.34■■□□□ 1.49
SMOQ99835 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SMOQ99835 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMOQ99835 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMOQ99835 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.34■■□□□ 1.49
SMOQ99835 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.34■■□□□ 1.49
SMOQ99835 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.34■■□□□ 1.49
SMOQ99835 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.34■■□□□ 1.49
SMOQ99835 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SMOQ99835 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SMOQ99835 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMOQ99835 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMOQ99835 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.33■■□□□ 1.49
SMOQ99835 AC131212.1-201ENST00000613771 668 ntBASIC24.33■■□□□ 1.49
SMOQ99835 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.33■■□□□ 1.49
SMOQ99835 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.33■■□□□ 1.49
SMOQ99835 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SMOQ99835 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMOQ99835 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
SMOQ99835 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.33■■□□□ 1.48
SMOQ99835 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.32■■□□□ 1.48
SMOQ99835 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
SMOQ99835 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMOQ99835 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.32■■□□□ 1.48
SMOQ99835 MIR6722-201ENST00000617286 78 ntBASIC24.32■■□□□ 1.48
SMOQ99835 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SMOQ99835 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMOQ99835 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
SMOQ99835 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SMOQ99835 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMOQ99835 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMOQ99835 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMOQ99835 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.31■■□□□ 1.48
SMOQ99835 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
SMOQ99835 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SMOQ99835 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.31■■□□□ 1.48
SMOQ99835 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SMOQ99835 AL022069.1-201ENST00000568025 1636 ntBASIC24.31■■□□□ 1.48
SMOQ99835 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMOQ99835 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SMOQ99835 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.3■■□□□ 1.48
SMOQ99835 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
SMOQ99835 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.3■■□□□ 1.48
SMOQ99835 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SMOQ99835 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.3■■□□□ 1.48
SMOQ99835 MIR6724-1-201ENST00000616420 92 ntBASIC24.3■■□□□ 1.48
SMOQ99835 MIR6724-2-201ENST00000616483 92 ntBASIC24.3■■□□□ 1.48
SMOQ99835 MIR6724-4-201ENST00000617390 92 ntBASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms