Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.032e-6■■■□□ 17.1
FUBP3Q96I24 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.122e-6■■■□□ 17.1
FUBP3Q96I24 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.98□□□□□ -1.132e-6■■■□□ 17.1
FUBP3Q96I24 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.82□□□□□ -1.162e-6■■■□□ 17.1
FUBP3Q96I24 TPD52-206ENST00000517462 2702 ntTSL 1 (best)6.81□□□□□ -1.322e-6■■■□□ 17.1
FUBP3Q96I24 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.332e-6■■■□□ 17.1
FUBP3Q96I24 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.5□□□□□ -1.372e-6■■■□□ 17.1
FUBP3Q96I24 SAP18-204ENST00000471009 670 ntTSL 27.64□□□□□ -1.194e-11■■■□□ 17.1
FUBP3Q96I24 SAP18-206ENST00000492245 405 ntTSL 46.76□□□□□ -1.334e-11■■■□□ 17.1
FUBP3Q96I24 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC12.16□□□□□ -0.467e-9■■■□□ 17.1
FUBP3Q96I24 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.537e-9■■■□□ 17.1
FUBP3Q96I24 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.57□□□□□ -1.27e-9■■■□□ 17.1
FUBP3Q96I24 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.46□□□□□ -1.867e-9■■■□□ 17.1
FUBP3Q96I24 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.41e-11■■■□□ 17.1
FUBP3Q96I24 RPS10-NUDT3-203ENST00000639877 2911 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.71e-11■■■□□ 17.1
FUBP3Q96I24 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.81e-11■■■□□ 17.1
FUBP3Q96I24 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.194e-13■■■□□ 17
FUBP3Q96I24 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.244e-13■■■□□ 17
FUBP3Q96I24 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC13.78□□□□□ -0.22e-6■■■□□ 17
FUBP3Q96I24 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.94□□□□□ -0.342e-6■■■□□ 17
FUBP3Q96I24 CUL4A-201ENST00000326335 3705 ntTSL 1 (best) BASIC10.63□□□□□ -0.712e-6■■■□□ 17
FUBP3Q96I24 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC9.98□□□□□ -0.812e-6■■■□□ 17
FUBP3Q96I24 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.36e-7■■■□□ 17
FUBP3Q96I24 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.861e-6■■■□□ 17
FUBP3Q96I24 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.572e-8■■■□□ 17
FUBP3Q96I24 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.492e-6■■■□□ 17
FUBP3Q96I24 TSPAN7-203ENST00000419600 1683 ntTSL 27.63□□□□□ -1.192e-6■■■□□ 17
FUBP3Q96I24 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.52e-7■■■□□ 17
FUBP3Q96I24 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.993e-7■■■□□ 17
FUBP3Q96I24 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.84■■□□□ 1.251e-7■■■□□ 17
FUBP3Q96I24 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.32■□□□□ 0.041e-7■■■□□ 17
FUBP3Q96I24 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.131e-7■■■□□ 17
FUBP3Q96I24 NEDD4L-232ENST00000591579 144 ntTSL 1 (best)13.98□□□□□ -0.171e-7■■■□□ 17
FUBP3Q96I24 NEDD4L-233ENST00000591989 233 ntTSL 313.21□□□□□ -0.291e-7■■■□□ 17
FUBP3Q96I24 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC8.87□□□□□ -0.991e-7■■■□□ 17
FUBP3Q96I24 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.081e-7■■■□□ 17
FUBP3Q96I24 NEDD4L-231ENST00000590694 165 ntTSL 56.91□□□□□ -1.31e-7■■■□□ 17
FUBP3Q96I24 NEDD4L-211ENST00000585363 241 ntTSL 56.03□□□□□ -1.441e-7■■■□□ 17
FUBP3Q96I24 NEDD4L-236ENST00000592846 484 ntTSL 45.87□□□□□ -1.471e-7■■■□□ 17
FUBP3Q96I24 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.432e-6■■■□□ 17
FUBP3Q96I24 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.492e-6■■■□□ 17
FUBP3Q96I24 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.52e-6■■■□□ 17
FUBP3Q96I24 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC10.91□□□□□ -0.661e-10■■■□□ 17
FUBP3Q96I24 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.72■■□□□ 1.715e-9■■■□□ 16.9
FUBP3Q96I24 HMGA2-208ENST00000537429 1527 ntTSL 1 (best)25.72■■□□□ 1.715e-9■■■□□ 16.9
FUBP3Q96I24 HMGA2-207ENST00000537275 1508 ntTSL 1 (best)25.72■■□□□ 1.715e-9■■■□□ 16.9
FUBP3Q96I24 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.75■■□□□ 1.555e-9■■■□□ 16.9
FUBP3Q96I24 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.462e-6■■■□□ 16.9
FUBP3Q96I24 STRN3-207ENST00000555358 2208 ntTSL 1 (best)23.96■■□□□ 1.432e-6■■■□□ 16.9
FUBP3Q96I24 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.45■■□□□ 1.345e-9■■■□□ 16.9
FUBP3Q96I24 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.36■■□□□ 1.335e-9■■■□□ 16.9
FUBP3Q96I24 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.275e-9■■■□□ 16.9
FUBP3Q96I24 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.792e-6■■■□□ 16.9
FUBP3Q96I24 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.482e-6■■■□□ 16.9
FUBP3Q96I24 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.145e-9■■■□□ 16.9
FUBP3Q96I24 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.062e-6■■■□□ 16.9
FUBP3Q96I24 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.075e-9■■■□□ 16.9
FUBP3Q96I24 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.072e-6■■■□□ 16.9
FUBP3Q96I24 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC13.32□□□□□ -0.282e-6■■■□□ 16.9
FUBP3Q96I24 SCAMP1-207ENST00000621999 4509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.335e-9■■■□□ 16.9
FUBP3Q96I24 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.422e-6■■■□□ 16.9
FUBP3Q96I24 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.522e-6■■■□□ 16.9
FUBP3Q96I24 HMGA2-209ENST00000539662 485 ntTSL 311.4□□□□□ -0.585e-9■■■□□ 16.9
FUBP3Q96I24 MBIP-202ENST00000359527 1449 ntTSL 1 (best) BASIC10.83□□□□□ -0.682e-6■■■□□ 16.9
FUBP3Q96I24 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.772e-6■■■□□ 16.9
FUBP3Q96I24 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.925e-9■■■□□ 16.9
FUBP3Q96I24 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.452e-6■■■□□ 16.9
FUBP3Q96I24 STRN3-206ENST00000555152 567 ntTSL 45.88□□□□□ -1.472e-6■■■□□ 16.9
FUBP3Q96I24 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.522e-6■■■□□ 16.9
FUBP3Q96I24 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.46□□□□□ -1.545e-9■■■□□ 16.9
FUBP3Q96I24 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.04□□□□□ -1.63e-15■■■□□ 16.9
FUBP3Q96I24 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.3□□□□□ -1.722e-6■■■□□ 16.9
FUBP3Q96I24 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.25□□□□□ -1.735e-9■■■□□ 16.9
FUBP3Q96I24 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.24□□□□□ -1.735e-9■■■□□ 16.9
FUBP3Q96I24 ARID2-208ENST00000479608 7761 ntTSL 1 (best)3.9□□□□□ -1.785e-9■■■□□ 16.9
FUBP3Q96I24 SCAMP1-201ENST00000320280 3766 ntTSL 33.53□□□□□ -1.845e-9■■■□□ 16.9
FUBP3Q96I24 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.68■□□□□ 0.93e-8■■■□□ 16.9
FUBP3Q96I24 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.543e-8■■■□□ 16.9
FUBP3Q96I24 PSPC1-204ENST00000492741 1709 ntTSL 223.26■■□□□ 1.311e-7■■■□□ 16.8
FUBP3Q96I24 PSPC1-203ENST00000471658 1647 ntTSL 1 (best)20.28■□□□□ 0.841e-7■■■□□ 16.8
FUBP3Q96I24 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.741e-7■■■□□ 16.8
FUBP3Q96I24 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.61e-7■■■□□ 16.8
FUBP3Q96I24 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.371e-7■■■□□ 16.8
FUBP3Q96I24 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.92■□□□□ 0.141e-7■■■□□ 16.8
FUBP3Q96I24 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.121e-7■■■□□ 16.8
FUBP3Q96I24 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.075e-10■■■□□ 16.8
FUBP3Q96I24 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.091e-7■■■□□ 16.8
FUBP3Q96I24 RRP1B-202ENST00000470886 4634 ntTSL 210.44□□□□□ -0.741e-7■■■□□ 16.8
FUBP3Q96I24 AC015802.4-201ENST00000589963 578 ntTSL 3 BASIC8.99□□□□□ -0.971e-7■■■□□ 16.8
FUBP3Q96I24 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.74□□□□□ -1.172e-6■■■□□ 16.8
FUBP3Q96I24 HACD2-203ENST00000471236 403 ntTSL 37.19□□□□□ -1.265e-10■■■□□ 16.8
FUBP3Q96I24 ADNP2-205ENST00000561195 124 ntTSL 36.34□□□□□ -1.391e-7■■■□□ 16.8
FUBP3Q96I24 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.44□□□□□ -1.542e-6■■■□□ 16.8
FUBP3Q96I24 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.632e-6■■■□□ 16.8
FUBP3Q96I24 PSPC1-208ENST00000635562 422 ntTSL 33.53□□□□□ -1.841e-7■■■□□ 16.8
FUBP3Q96I24 LMNB1-203ENST00000460265 3475 ntTSL 1 (best)15.37■□□□□ 0.053e-8■■■□□ 16.8
FUBP3Q96I24 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.043e-8■■■□□ 16.8
FUBP3Q96I24 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.175e-7■■■□□ 16.8
FUBP3Q96I24 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.245e-7■■■□□ 16.8
FUBP3Q96I24 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.545e-7■■■□□ 16.8
Retrieved 100 of 4,568 protein–RNA pairs in 330.4 ms