RNA–Protein interactions for RNA: ENST00000396128.8

KLHL28-202, Transcript of kelch like family member 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL28, Length 6,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-202ENST00000396128 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.73
KLHL28-202ENST00000396128 NISCHQ9Y2I1 1504 aa9.83□□□□□ -0.84
KLHL28-202ENST00000396128 FAM9AQ8IZU1 332 aaPredicted RBP9.77□□□□□ -0.84
KLHL28-202ENST00000396128 SUPT5HO00267 1087 aaKnown RBP9.62□□□□□ -0.87
KLHL28-202ENST00000396128 APLP2Q06481 763 aa9.53□□□□□ -0.88
KLHL28-202ENST00000396128 SHROOM4Q9ULL8 1493 aa9.45□□□□□ -0.9
KLHL28-202ENST00000396128 PELP1Q8IZL8 1130 aaKnown RBP9.38□□□□□ -0.91
KLHL28-202ENST00000396128 EHMT2Q96KQ7 1210 aa9.28□□□□□ -0.92
KLHL28-202ENST00000396128 ATP1B4Q9UN42 357 aaPredicted RBP9.14□□□□□ -0.95
KLHL28-202ENST00000396128 TRIM41Q8WV44 630 aa9.05□□□□□ -0.96
KLHL28-202ENST00000396128 RANGAP1P46060 587 aaPredicted RBP9.04□□□□□ -0.96
KLHL28-202ENST00000396128 MYT1LQ9UL68 1186 aa9.01□□□□□ -0.97
KLHL28-202ENST00000396128 UBTFP17480 764 aaKnown RBP9□□□□□ -0.97
KLHL28-202ENST00000396128 CCER1Q8TC90 406 aaPredicted RBP8.98□□□□□ -0.97
KLHL28-202ENST00000396128 TTBK1Q5TCY1 1321 aaPredicted RBP8.96□□□□□ -0.98
KLHL28-202ENST00000396128 ZEB1P37275 1124 aaPredicted RBP8.92□□□□□ -0.98
KLHL28-202ENST00000396128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.91□□□□□ -0.98
KLHL28-202ENST00000396128 HNRNPUL2Q1KMD3 747 aaKnown RBP8.91□□□□□ -0.98
KLHL28-202ENST00000396128 ERICH6Q7L0X2 663 aa8.87□□□□□ -0.99
KLHL28-202ENST00000396128 PCGF6Q9BYE7 350 aa8.85□□□□□ -0.99
KLHL28-202ENST00000396128 CENPBP07199 599 aaPredicted RBP8.82□□□□□ -1
KLHL28-202ENST00000396128 NEFLP07196 543 aa8.79□□□□□ -1
KLHL28-202ENST00000396128 ABCC9O60706 1549 aa8.69□□□□□ -1.02
KLHL28-202ENST00000396128 CHIC1Q5VXU3 224 aa8.67□□□□□ -1.02
KLHL28-202ENST00000396128 SLC4A1APQ9BWU0 796 aaKnown RBP8.66□□□□□ -1.02
KLHL28-202ENST00000396128 POLR3GLQ9BT43 218 aa8.64□□□□□ -1.03
KLHL28-202ENST00000396128 DAXXQ9UER7 740 aaPredicted RBP8.63□□□□□ -1.03
KLHL28-202ENST00000396128 ITGAEP38570 1179 aa8.62□□□□□ -1.03
KLHL28-202ENST00000396128 PABPN1Q86U42 306 aaKnown RBP eCLIP8.61□□□□□ -1.03
KLHL28-202ENST00000396128 FBLN2P98095 1184 aa8.58□□□□□ -1.04
KLHL28-202ENST00000396128 ESF1Q9H501 851 aaKnown RBP8.54□□□□□ -1.04
KLHL28-202ENST00000396128 TRIM26Q12899 539 aaPredicted RBP8.53□□□□□ -1.04
KLHL28-202ENST00000396128 BCANQ96GW7 911 aa8.52□□□□□ -1.05
KLHL28-202ENST00000396128 TRIM52Q96A61 297 aa8.52□□□□□ -1.05
KLHL28-202ENST00000396128 FAM50AQ14320 339 aaKnown RBP8.51□□□□□ -1.05
KLHL28-202ENST00000396128 NPM1P06748 294 aaKnown RBP eCLIP8.5□□□□□ -1.05
KLHL28-202ENST00000396128 NEFMP07197 916 aa8.47□□□□□ -1.05
KLHL28-202ENST00000396128 PPARGC1BQ86YN6 1023 aaKnown RBP8.47□□□□□ -1.05
KLHL28-202ENST00000396128 YTHDC1Q96MU7 727 aaKnown RBP8.47□□□□□ -1.05
KLHL28-202ENST00000396128 CDK11AQ9UQ88 783 aaPredicted RBP8.47□□□□□ -1.05
KLHL28-202ENST00000396128 ZBTB47Q9UFB7 747 aaPredicted RBP8.46□□□□□ -1.05
KLHL28-202ENST00000396128 CLSPNQ9HAW4 1339 aa8.42□□□□□ -1.06
KLHL28-202ENST00000396128 STAG3Q9UJ98 1225 aa8.39□□□□□ -1.07
KLHL28-202ENST00000396128 CNGB1Q14028 1251 aaPredicted RBP8.39□□□□□ -1.07
KLHL28-202ENST00000396128 ZNF316A6NFI3 1004 aaPredicted RBP8.38□□□□□ -1.07
KLHL28-202ENST00000396128 SLC24A1O60721 1099 aa8.38□□□□□ -1.07
KLHL28-202ENST00000396128 ZNF326Q5BKZ1 582 aaKnown RBP8.34□□□□□ -1.08
KLHL28-202ENST00000396128 ZNF777Q9ULD5 760 aaPredicted RBP8.31□□□□□ -1.08
KLHL28-202ENST00000396128 CANXP27824 592 aaKnown RBP8.3□□□□□ -1.08
KLHL28-202ENST00000396128 MYT1Q01538 1121 aa8.3□□□□□ -1.08
KLHL28-202ENST00000396128 NEUROD1Q13562 356 aa8.3□□□□□ -1.08
KLHL28-202ENST00000396128 SCRIBQ14160 1630 aa8.29□□□□□ -1.08
KLHL28-202ENST00000396128 ANP32CO43423 234 aa8.27□□□□□ -1.09
KLHL28-202ENST00000396128 LOC105371045A0A1W2PR82 267 aa8.26□□□□□ -1.09
KLHL28-202ENST00000396128 RB1CC1Q8TDY2 1594 aa8.26□□□□□ -1.09
KLHL28-202ENST00000396128 CHGAP10645 457 aaKnown RBP8.26□□□□□ -1.09
KLHL28-202ENST00000396128 PLPPR3Q6T4P5 718 aa8.25□□□□□ -1.09
KLHL28-202ENST00000396128 P3H3Q8IVL6 736 aa8.25□□□□□ -1.09
KLHL28-202ENST00000396128 CHMP7Q8WUX9 453 aaPredicted RBP8.25□□□□□ -1.09
KLHL28-202ENST00000396128 ARID3CA6NKF2 412 aa8.24□□□□□ -1.09
KLHL28-202ENST00000396128 RTL5Q5HYW3 569 aaPredicted RBP8.24□□□□□ -1.09
KLHL28-202ENST00000396128 HRCP23327 699 aa8.23□□□□□ -1.09
KLHL28-202ENST00000396128 CCDC180Q9P1Z9 1646 aa8.23□□□□□ -1.09
KLHL28-202ENST00000396128 CSRNP3Q8WYN3 585 aa8.22□□□□□ -1.09
KLHL28-202ENST00000396128 ACIN1Q9UKV3 1341 aaKnown RBP8.19□□□□□ -1.1
KLHL28-202ENST00000396128 TSPY4P0CV99 314 aa8.18□□□□□ -1.1
KLHL28-202ENST00000396128 TSPY10P0CW01 314 aa8.18□□□□□ -1.1
KLHL28-202ENST00000396128 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
KLHL28-202ENST00000396128 SCAF1Q9H7N4 1312 aaKnown RBP8.16□□□□□ -1.1
KLHL28-202ENST00000396128 ERCC6Q03468 1493 aa8.15□□□□□ -1.1
KLHL28-202ENST00000396128 PPP1R15AO75807 674 aaPredicted RBP8.15□□□□□ -1.11
KLHL28-202ENST00000396128 DIEXFQ68CQ4 756 aaKnown RBP8.14□□□□□ -1.11
KLHL28-202ENST00000396128 C14orf37Q86TY3 774 aa8.13□□□□□ -1.11
KLHL28-202ENST00000396128 ARID4BQ4LE39 1312 aaPredicted RBP8.13□□□□□ -1.11
KLHL28-202ENST00000396128 TONSLQ96HA7 1378 aa8.12□□□□□ -1.11
KLHL28-202ENST00000396128 HAP1P54257 671 aaPredicted RBP8.12□□□□□ -1.11
KLHL28-202ENST00000396128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.12□□□□□ -1.11
KLHL28-202ENST00000396128 NACADO15069 1562 aa8.1□□□□□ -1.11
KLHL28-202ENST00000396128 PLEKHD1A6NEE1 506 aa8.09□□□□□ -1.11
KLHL28-202ENST00000396128 RSF1Q96T23 1441 aaPredicted RBP8.09□□□□□ -1.11
KLHL28-202ENST00000396128 BCL11AQ9H165 835 aa8.09□□□□□ -1.11
KLHL28-202ENST00000396128 ZCCHC6Q5VYS8 1495 aaKnown RBP8.09□□□□□ -1.11
KLHL28-202ENST00000396128 MTUS2Q5JR59 1369 aa8.09□□□□□ -1.11
KLHL28-202ENST00000396128 A0A0G2JS52 829 aa8.09□□□□□ -1.12
KLHL28-202ENST00000396128 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.06□□□□□ -1.12
KLHL28-202ENST00000396128 UPF2Q9HAU5 1272 aaKnown RBP8.05□□□□□ -1.12
KLHL28-202ENST00000396128 WDR43Q15061 677 aaKnown RBP eCLIP8.04□□□□□ -1.12
KLHL28-202ENST00000396128 BAZ1BQ9UIG0 1483 aaKnown RBP8.04□□□□□ -1.12
KLHL28-202ENST00000396128 KCNH8Q96L42 1107 aa8.04□□□□□ -1.12
KLHL28-202ENST00000396128 HDGFP51858 240 aaKnown RBP8.04□□□□□ -1.12
KLHL28-202ENST00000396128 ZBTB7CA1YPR0 619 aa8.04□□□□□ -1.12
KLHL28-202ENST00000396128 TRHP20396 242 aaPredicted RBP8.03□□□□□ -1.12
KLHL28-202ENST00000396128 MYH16Q9H6N6 1097 aa8.03□□□□□ -1.12
KLHL28-202ENST00000396128 ANP32BQ92688 251 aaKnown RBP8.02□□□□□ -1.13
KLHL28-202ENST00000396128 HSP90AA1P07900 732 aaKnown RBP8.01□□□□□ -1.13
KLHL28-202ENST00000396128 CDCA8Q53HL2 280 aa8.01□□□□□ -1.13
KLHL28-202ENST00000396128 CDK11BP21127 795 aaKnown RBP8.01□□□□□ -1.13
KLHL28-202ENST00000396128 CHIC2Q9UKJ5 165 aa8□□□□□ -1.13
KLHL28-202ENST00000396128 EEA1Q15075 1411 aa8□□□□□ -1.13
KLHL28-202ENST00000396128 ANP32AP39687 249 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms