RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
RRP1B-201ENST00000340648 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
RRP1B-201ENST00000340648 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
RRP1B-201ENST00000340648 SHROOM4Q9ULL8 1493 aa24.56■■□□□ 1.52
RRP1B-201ENST00000340648 PCGF6Q9BYE7 350 aa23.82■■□□□ 1.4
RRP1B-201ENST00000340648 EHMT2Q96KQ7 1210 aa23.75■■□□□ 1.39
RRP1B-201ENST00000340648 FAM9AQ8IZU1 332 aaPredicted RBP23.32■■□□□ 1.32
RRP1B-201ENST00000340648 HRCP23327 699 aa23.15■■□□□ 1.3
RRP1B-201ENST00000340648 ZEB1P37275 1124 aaPredicted RBP23.07■■□□□ 1.28
RRP1B-201ENST00000340648 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
RRP1B-201ENST00000340648 PELP1Q8IZL8 1130 aaKnown RBP22.93■■□□□ 1.26
RRP1B-201ENST00000340648 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
RRP1B-201ENST00000340648 CENPBP07199 599 aaPredicted RBP22.85■■□□□ 1.25
RRP1B-201ENST00000340648 CCER1Q8TC90 406 aaPredicted RBP22.85■■□□□ 1.25
RRP1B-201ENST00000340648 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
RRP1B-201ENST00000340648 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
RRP1B-201ENST00000340648 TRIM26Q12899 539 aaPredicted RBP22.78■■□□□ 1.24
RRP1B-201ENST00000340648 APLP2Q06481 763 aa22.76■■□□□ 1.23
RRP1B-201ENST00000340648 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
RRP1B-201ENST00000340648 YTHDC1Q96MU7 727 aaKnown RBP22.51■■□□□ 1.19
RRP1B-201ENST00000340648 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
RRP1B-201ENST00000340648 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
RRP1B-201ENST00000340648 MYT1Q01538 1121 aa22.31■■□□□ 1.16
RRP1B-201ENST00000340648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
RRP1B-201ENST00000340648 ERICH6Q7L0X2 663 aa22.04■■□□□ 1.12
RRP1B-201ENST00000340648 DIEXFQ68CQ4 756 aaKnown RBP21.99■■□□□ 1.11
RRP1B-201ENST00000340648 NEFLP07196 543 aa21.92■■□□□ 1.1
RRP1B-201ENST00000340648 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
RRP1B-201ENST00000340648 ATP1B4Q9UN42 357 aaPredicted RBP21.89■■□□□ 1.1
RRP1B-201ENST00000340648 GTF3C3Q9Y5Q9 886 aa21.83■■□□□ 1.08
RRP1B-201ENST00000340648 ITGAEP38570 1179 aa21.7■■□□□ 1.06
RRP1B-201ENST00000340648 DCAF1Q9Y4B6 1507 aa21.65■■□□□ 1.06
RRP1B-201ENST00000340648 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
RRP1B-201ENST00000340648 MYO15BQ96JP2 1530 aa21.61■■□□□ 1.05
RRP1B-201ENST00000340648 ZCCHC6Q5VYS8 1495 aaKnown RBP21.47■■□□□ 1.03
RRP1B-201ENST00000340648 ZNF316A6NFI3 1004 aaPredicted RBP21.47■■□□□ 1.03
RRP1B-201ENST00000340648 SCAF1Q9H7N4 1312 aaKnown RBP21.43■■□□□ 1.02
RRP1B-201ENST00000340648 NEUROD1Q13562 356 aa21.34■■□□□ 1.01
RRP1B-201ENST00000340648 BCANQ96GW7 911 aa21.32■■□□□ 1
RRP1B-201ENST00000340648 POLR3GLQ9BT43 218 aa21.18■□□□□ 0.98
RRP1B-201ENST00000340648 CNGB1Q14028 1251 aaPredicted RBP21.18■□□□□ 0.98
RRP1B-201ENST00000340648 ABCC9O60706 1549 aa21.14■□□□□ 0.98
RRP1B-201ENST00000340648 FAM50AQ14320 339 aaKnown RBP21.12■□□□□ 0.97
RRP1B-201ENST00000340648 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
RRP1B-201ENST00000340648 CCDC180Q9P1Z9 1646 aa21.02■□□□□ 0.96
RRP1B-201ENST00000340648 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
RRP1B-201ENST00000340648 SCRIBQ14160 1630 aa21■□□□□ 0.95
RRP1B-201ENST00000340648 ANP32CO43423 234 aa20.98■□□□□ 0.95
RRP1B-201ENST00000340648 MIER1Q8N108 512 aa20.94■□□□□ 0.94
RRP1B-201ENST00000340648 DAXXQ9UER7 740 aaPredicted RBP20.93■□□□□ 0.94
RRP1B-201ENST00000340648 RTL5Q5HYW3 569 aaPredicted RBP20.89■□□□□ 0.93
RRP1B-201ENST00000340648 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
RRP1B-201ENST00000340648 FKBP8Q14318 412 aa20.83■□□□□ 0.93
RRP1B-201ENST00000340648 CLSPNQ9HAW4 1339 aa20.82■□□□□ 0.92
RRP1B-201ENST00000340648 TRIM52Q96A61 297 aa20.82■□□□□ 0.92
RRP1B-201ENST00000340648 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
RRP1B-201ENST00000340648 DDX10Q13206 875 aaKnown RBP20.7■□□□□ 0.9
RRP1B-201ENST00000340648 P3H3Q8IVL6 736 aa20.68■□□□□ 0.9
RRP1B-201ENST00000340648 CEP162Q5TB80 1403 aa20.64■□□□□ 0.9
RRP1B-201ENST00000340648 ZNF326Q5BKZ1 582 aaKnown RBP20.61■□□□□ 0.89
RRP1B-201ENST00000340648 HNRNPUQ00839 825 aaKnown RBP eCLIP20.55■□□□□ 0.88
RRP1B-201ENST00000340648 CLIP1P30622 1438 aa20.55■□□□□ 0.88
RRP1B-201ENST00000340648 TONSLQ96HA7 1378 aa20.49■□□□□ 0.87
RRP1B-201ENST00000340648 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
RRP1B-201ENST00000340648 ANP32AP39687 249 aaKnown RBP20.45■□□□□ 0.86
RRP1B-201ENST00000340648 MYT1LQ9UL68 1186 aa20.45■□□□□ 0.86
RRP1B-201ENST00000340648 GOLGA3Q08378 1498 aa20.44■□□□□ 0.86
RRP1B-201ENST00000340648 TNIKQ9UKE5 1360 aa20.42■□□□□ 0.86
RRP1B-201ENST00000340648 RB1CC1Q8TDY2 1594 aa20.4■□□□□ 0.86
RRP1B-201ENST00000340648 IRX6P78412 446 aaPredicted RBP20.4■□□□□ 0.86
RRP1B-201ENST00000340648 FAM9BQ8IZU0 186 aa20.4■□□□□ 0.86
RRP1B-201ENST00000340648 ARID3CA6NKF2 412 aa20.4■□□□□ 0.86
RRP1B-201ENST00000340648 NPM2Q86SE8 214 aaKnown RBP20.39■□□□□ 0.86
RRP1B-201ENST00000340648 EEA1Q15075 1411 aa20.38■□□□□ 0.85
RRP1B-201ENST00000340648 ANP32EQ9BTT0 268 aa20.37■□□□□ 0.85
RRP1B-201ENST00000340648 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
RRP1B-201ENST00000340648 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
RRP1B-201ENST00000340648 NBR1Q14596 966 aa20.29■□□□□ 0.84
RRP1B-201ENST00000340648 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
RRP1B-201ENST00000340648 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
RRP1B-201ENST00000340648 SOGA1O94964 1423 aa20.22■□□□□ 0.83
RRP1B-201ENST00000340648 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
RRP1B-201ENST00000340648 MRS2Q9HD23 443 aa20.21■□□□□ 0.83
RRP1B-201ENST00000340648 CCDC136Q96JN2 1154 aa20.2■□□□□ 0.82
RRP1B-201ENST00000340648 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
RRP1B-201ENST00000340648 ZNF777Q9ULD5 760 aaPredicted RBP20.15■□□□□ 0.82
RRP1B-201ENST00000340648 SALL2Q9Y467 1007 aaPredicted RBP20.15■□□□□ 0.82
RRP1B-201ENST00000340648 ZBTB47Q9UFB7 747 aaPredicted RBP20.14■□□□□ 0.81
RRP1B-201ENST00000340648 SIN3AQ96ST3 1273 aa20.12■□□□□ 0.81
RRP1B-201ENST00000340648 CANXP27824 592 aaKnown RBP20.1■□□□□ 0.81
RRP1B-201ENST00000340648 TMC1Q8TDI8 760 aa20.07■□□□□ 0.8
RRP1B-201ENST00000340648 MTUS2Q5JR59 1369 aa20.06■□□□□ 0.8
RRP1B-201ENST00000340648 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
RRP1B-201ENST00000340648 FBLN2P98095 1184 aa20.05■□□□□ 0.8
RRP1B-201ENST00000340648 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
RRP1B-201ENST00000340648 EIF5BO60841 1220 aaKnown RBP20.05■□□□□ 0.8
RRP1B-201ENST00000340648 CCDC88BA6NC98 1476 aa20.04■□□□□ 0.8
RRP1B-201ENST00000340648 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
RRP1B-201ENST00000340648 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.79
RRP1B-201ENST00000340648 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms