RNA–Protein interactions for RNA: ENST00000529006.6

KDM2A-210, Transcript of lysine demethylase 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM2A, Length 6,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-210ENST00000529006 DCAF8L2P0C7V8 631 aa21.19■□□□□ 0.98
KDM2A-210ENST00000529006 EHMT2Q96KQ7 1210 aa19.84■□□□□ 0.77
KDM2A-210ENST00000529006 SUPT5HO00267 1087 aaKnown RBP19.78■□□□□ 0.76
KDM2A-210ENST00000529006 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
KDM2A-210ENST00000529006 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
KDM2A-210ENST00000529006 APLP2Q06481 763 aa19.28■□□□□ 0.68
KDM2A-210ENST00000529006 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
KDM2A-210ENST00000529006 FAM9AQ8IZU1 332 aaPredicted RBP19.11■□□□□ 0.65
KDM2A-210ENST00000529006 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
KDM2A-210ENST00000529006 RANGAP1P46060 587 aaPredicted RBP18.9■□□□□ 0.62
KDM2A-210ENST00000529006 ATP1B4Q9UN42 357 aaPredicted RBP18.82■□□□□ 0.6
KDM2A-210ENST00000529006 CCER1Q8TC90 406 aaPredicted RBP18.81■□□□□ 0.6
KDM2A-210ENST00000529006 PCGF6Q9BYE7 350 aa18.71■□□□□ 0.59
KDM2A-210ENST00000529006 CENPBP07199 599 aaPredicted RBP18.54■□□□□ 0.56
KDM2A-210ENST00000529006 NEFLP07196 543 aa18.43■□□□□ 0.54
KDM2A-210ENST00000529006 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
KDM2A-210ENST00000529006 MYT1Q01538 1121 aa18.4■□□□□ 0.54
KDM2A-210ENST00000529006 MYT1LQ9UL68 1186 aa18.31■□□□□ 0.52
KDM2A-210ENST00000529006 UBTFP17480 764 aaKnown RBP18.24■□□□□ 0.51
KDM2A-210ENST00000529006 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
KDM2A-210ENST00000529006 DAXXQ9UER7 740 aaPredicted RBP18.21■□□□□ 0.51
KDM2A-210ENST00000529006 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
KDM2A-210ENST00000529006 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
KDM2A-210ENST00000529006 ZEB1P37275 1124 aaPredicted RBP18.17■□□□□ 0.5
KDM2A-210ENST00000529006 CHIC1Q5VXU3 224 aa18.16■□□□□ 0.5
KDM2A-210ENST00000529006 CNGB1Q14028 1251 aaPredicted RBP18.07■□□□□ 0.48
KDM2A-210ENST00000529006 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
KDM2A-210ENST00000529006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.03■□□□□ 0.48
KDM2A-210ENST00000529006 HNRNPUL2Q1KMD3 747 aaKnown RBP18.03■□□□□ 0.48
KDM2A-210ENST00000529006 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
KDM2A-210ENST00000529006 ITGAEP38570 1179 aa17.95■□□□□ 0.46
KDM2A-210ENST00000529006 ZNF316A6NFI3 1004 aaPredicted RBP17.76■□□□□ 0.43
KDM2A-210ENST00000529006 CLSPNQ9HAW4 1339 aa17.75■□□□□ 0.43
KDM2A-210ENST00000529006 RTL5Q5HYW3 569 aaPredicted RBP17.58■□□□□ 0.4
KDM2A-210ENST00000529006 SLC24A1O60721 1099 aa17.53■□□□□ 0.4
KDM2A-210ENST00000529006 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
KDM2A-210ENST00000529006 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
KDM2A-210ENST00000529006 ZBTB47Q9UFB7 747 aaPredicted RBP17.41■□□□□ 0.38
KDM2A-210ENST00000529006 TRIM52Q96A61 297 aa17.36■□□□□ 0.37
KDM2A-210ENST00000529006 HRCP23327 699 aa17.35■□□□□ 0.37
KDM2A-210ENST00000529006 FAM50AQ14320 339 aaKnown RBP17.33■□□□□ 0.37
KDM2A-210ENST00000529006 BCANQ96GW7 911 aa17.31■□□□□ 0.36
KDM2A-210ENST00000529006 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
KDM2A-210ENST00000529006 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
KDM2A-210ENST00000529006 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
KDM2A-210ENST00000529006 LOC105371045A0A1W2PR82 267 aa17.18■□□□□ 0.34
KDM2A-210ENST00000529006 DIEXFQ68CQ4 756 aaKnown RBP17.1■□□□□ 0.33
KDM2A-210ENST00000529006 NEFMP07197 916 aa17.1■□□□□ 0.33
KDM2A-210ENST00000529006 FBLN2P98095 1184 aa17.08■□□□□ 0.33
KDM2A-210ENST00000529006 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
KDM2A-210ENST00000529006 CDK11AQ9UQ88 783 aaPredicted RBP17.05■□□□□ 0.32
KDM2A-210ENST00000529006 ANP32CO43423 234 aa17.02■□□□□ 0.31
KDM2A-210ENST00000529006 NPM2Q86SE8 214 aaKnown RBP16.95■□□□□ 0.3
KDM2A-210ENST00000529006 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
KDM2A-210ENST00000529006 ESF1Q9H501 851 aaKnown RBP16.86■□□□□ 0.29
KDM2A-210ENST00000529006 HSP90AA1P07900 732 aaKnown RBP16.83■□□□□ 0.29
KDM2A-210ENST00000529006 ANP32BQ92688 251 aaKnown RBP16.82■□□□□ 0.28
KDM2A-210ENST00000529006 ANP32AP39687 249 aaKnown RBP16.82■□□□□ 0.28
KDM2A-210ENST00000529006 ZNF777Q9ULD5 760 aaPredicted RBP16.81■□□□□ 0.28
KDM2A-210ENST00000529006 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
KDM2A-210ENST00000529006 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
KDM2A-210ENST00000529006 CHGAP10645 457 aaKnown RBP16.79■□□□□ 0.28
KDM2A-210ENST00000529006 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
KDM2A-210ENST00000529006 A0A0G2JS52 829 aa16.77■□□□□ 0.28
KDM2A-210ENST00000529006 EIF5BO60841 1220 aaKnown RBP16.77■□□□□ 0.27
KDM2A-210ENST00000529006 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.27
KDM2A-210ENST00000529006 P3H3Q8IVL6 736 aa16.75■□□□□ 0.27
KDM2A-210ENST00000529006 CDK11BP21127 795 aaKnown RBP16.66■□□□□ 0.26
KDM2A-210ENST00000529006 ARXQ96QS3 562 aa16.66■□□□□ 0.26
KDM2A-210ENST00000529006 PLEKHG5O94827 1062 aa16.64■□□□□ 0.25
KDM2A-210ENST00000529006 UPF2Q9HAU5 1272 aaKnown RBP16.63■□□□□ 0.25
KDM2A-210ENST00000529006 SALL2Q9Y467 1007 aaPredicted RBP16.63■□□□□ 0.25
KDM2A-210ENST00000529006 ZBTB7CA1YPR0 619 aa16.62■□□□□ 0.25
KDM2A-210ENST00000529006 TULP1O00294 542 aaPredicted RBP16.54■□□□□ 0.24
KDM2A-210ENST00000529006 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
KDM2A-210ENST00000529006 FAM9BQ8IZU0 186 aa16.5■□□□□ 0.23
KDM2A-210ENST00000529006 FKBP8Q14318 412 aa16.49■□□□□ 0.23
KDM2A-210ENST00000529006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.234e-7■■■■□ 24.6
KDM2A-210ENST00000529006 C14orf37Q86TY3 774 aa16.46■□□□□ 0.23
KDM2A-210ENST00000529006 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.23
KDM2A-210ENST00000529006 NBR1Q14596 966 aa16.46■□□□□ 0.23
KDM2A-210ENST00000529006 ABCC9O60706 1549 aa16.45■□□□□ 0.22
KDM2A-210ENST00000529006 GLIPR1L2Q4G1C9 344 aa16.42■□□□□ 0.22
KDM2A-210ENST00000529006 HNRNPUQ00839 825 aaKnown RBP eCLIP16.42■□□□□ 0.22
KDM2A-210ENST00000529006 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
KDM2A-210ENST00000529006 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
KDM2A-210ENST00000529006 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
KDM2A-210ENST00000529006 TONSLQ96HA7 1378 aa16.37■□□□□ 0.21
KDM2A-210ENST00000529006 TPRNQ4KMQ1 711 aa16.35■□□□□ 0.21
KDM2A-210ENST00000529006 HAP1P54257 671 aaPredicted RBP16.33■□□□□ 0.21
KDM2A-210ENST00000529006 KDM2AQ9Y2K7 1162 aa16.33■□□□□ 0.21
KDM2A-210ENST00000529006 CCDC136Q96JN2 1154 aa16.33■□□□□ 0.2
KDM2A-210ENST00000529006 TMC1Q8TDI8 760 aa16.33■□□□□ 0.2
KDM2A-210ENST00000529006 CHIC2Q9UKJ5 165 aa16.3■□□□□ 0.2
KDM2A-210ENST00000529006 ACIN1Q9UKV3 1341 aaKnown RBP16.3■□□□□ 0.2
KDM2A-210ENST00000529006 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
KDM2A-210ENST00000529006 DDX10Q13206 875 aaKnown RBP16.29■□□□□ 0.2
KDM2A-210ENST00000529006 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
KDM2A-210ENST00000529006 NCLP19338 710 aaKnown RBP16.28■□□□□ 0.2
KDM2A-210ENST00000529006 NCBP3Q53F19 620 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms