Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
FNDC9Q8TBE3 AC022211.4-201ENST00000625094 2161 ntBASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC9Q8TBE3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 MTDHP2-201ENST00000601468 714 ntBASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC9Q8TBE3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.71■□□□□ 0.91
FNDC9Q8TBE3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.71■□□□□ 0.91
FNDC9Q8TBE3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC9Q8TBE3 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.71■□□□□ 0.91
FNDC9Q8TBE3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC9Q8TBE3 AC010997.5-201ENST00000609182 354 ntBASIC20.71■□□□□ 0.91
FNDC9Q8TBE3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
FNDC9Q8TBE3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC9Q8TBE3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
FNDC9Q8TBE3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FNDC9Q8TBE3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.7■□□□□ 0.9
FNDC9Q8TBE3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.7■□□□□ 0.9
FNDC9Q8TBE3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.7■□□□□ 0.9
FNDC9Q8TBE3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.7■□□□□ 0.9
FNDC9Q8TBE3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.7■□□□□ 0.9
FNDC9Q8TBE3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.7■□□□□ 0.9
FNDC9Q8TBE3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FNDC9Q8TBE3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FNDC9Q8TBE3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FNDC9Q8TBE3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC9Q8TBE3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC9Q8TBE3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
FNDC9Q8TBE3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC9Q8TBE3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC9Q8TBE3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.69■□□□□ 0.9
FNDC9Q8TBE3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.69■□□□□ 0.9
FNDC9Q8TBE3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC9Q8TBE3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.69■□□□□ 0.9
FNDC9Q8TBE3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC9Q8TBE3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC9Q8TBE3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC9Q8TBE3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FNDC9Q8TBE3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC9Q8TBE3 SNX5-217ENST00000606557 1087 ntBASIC20.68■□□□□ 0.9
FNDC9Q8TBE3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC9Q8TBE3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC9Q8TBE3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC9Q8TBE3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC9Q8TBE3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC9Q8TBE3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC9Q8TBE3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC9Q8TBE3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC9Q8TBE3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC9Q8TBE3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms