Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 RARRES2P2-201ENST00000394842 485 ntBASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL55Q7Z7F7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL55Q7Z7F7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPL55Q7Z7F7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL55Q7Z7F7 MIR6765-201ENST00000614092 87 ntBASIC14.74□□□□□ -0.05
MRPL55Q7Z7F7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL55Q7Z7F7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPL55Q7Z7F7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL55Q7Z7F7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL55Q7Z7F7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL55Q7Z7F7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL55Q7Z7F7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC14.73□□□□□ -0.05
MRPL55Q7Z7F7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPL55Q7Z7F7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPL55Q7Z7F7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPL55Q7Z7F7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC14.73□□□□□ -0.05
MRPL55Q7Z7F7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC14.73□□□□□ -0.05
MRPL55Q7Z7F7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPL55Q7Z7F7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPL55Q7Z7F7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPL55Q7Z7F7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC14.73□□□□□ -0.05
MRPL55Q7Z7F7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC14.73□□□□□ -0.05
MRPL55Q7Z7F7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPL55Q7Z7F7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 AC004812.2-201ENST00000611079 2094 ntBASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 AC087393.1-201ENST00000582896 145 ntBASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC14.71□□□□□ -0.05
MRPL55Q7Z7F7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
MRPL55Q7Z7F7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC14.71□□□□□ -0.06
MRPL55Q7Z7F7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
MRPL55Q7Z7F7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
MRPL55Q7Z7F7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
MRPL55Q7Z7F7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 AL592295.1-201ENST00000400984 884 ntBASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 DUX4L9-201ENST00000449051 1259 ntBASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 SPCS2P3-201ENST00000500401 656 ntBASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 HSD17B1P1-201ENST00000590052 955 ntBASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
MRPL55Q7Z7F7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms