Protein–RNA interactions for Protein: Q07666

KHDRBS1, KH domain-containing, RNA-binding, signal transduction-associated protein 1, humanhuman

Known RBP eCLIP

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS1Q07666 TRIT1-215ENST00000541099 545 ntTSL 1 (best) BASIC10.14□□□□□ -0.792e-7■□□□□ 9.3
KHDRBS1Q07666 TRIT1-213ENST00000495175 1156 ntTSL 1 (best)9.75□□□□□ -0.852e-7■□□□□ 9.3
KHDRBS1Q07666 TRIT1-211ENST00000491865 738 ntTSL 58.99□□□□□ -0.972e-7■□□□□ 9.3
KHDRBS1Q07666 TRIT1-203ENST00000441669 1851 ntTSL 1 (best) BASIC8.04□□□□□ -1.122e-7■□□□□ 9.3
KHDRBS1Q07666 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.211e-9■□□□□ 9.3
KHDRBS1Q07666 TRIT1-210ENST00000489945 861 ntTSL 57.33□□□□□ -1.242e-7■□□□□ 9.3
KHDRBS1Q07666 TRIT1-208ENST00000469476 773 ntTSL 55.21□□□□□ -1.582e-7■□□□□ 9.3
KHDRBS1Q07666 MT-TL1-201ENST00000386347 75 ntBASIC2.76□□□□□ -1.977e-26■□□□□ 9.2
KHDRBS1Q07666 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.654e-6■□□□□ 9.2
KHDRBS1Q07666 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.27□□□□□ -2.211e-323■□□□□ 9.2
KHDRBS1Q07666 CASP3-202ENST00000393585 2624 ntTSL 1 (best) BASIC10.03□□□□□ -0.83e-7■□□□□ 9.2
KHDRBS1Q07666 CASP3-201ENST00000308394 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.873e-7■□□□□ 9.2
KHDRBS1Q07666 CASP3-206ENST00000523916 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.883e-7■□□□□ 9.2
KHDRBS1Q07666 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.44□□□□□ -1.063e-7■□□□□ 9.2
KHDRBS1Q07666 SGPL1-204ENST00000486993 537 ntTSL 1 (best)17.64■□□□□ 0.412e-9■□□□□ 9.1
KHDRBS1Q07666 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.662e-9■□□□□ 9.1
KHDRBS1Q07666 KLHDC10-202ENST00000463413 503 ntTSL 221.88■■□□□ 1.093e-6■□□□□ 9.1
KHDRBS1Q07666 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.633e-6■□□□□ 9.1
KHDRBS1Q07666 KLHDC10-203ENST00000468226 772 ntTSL 36.22□□□□□ -1.413e-6■□□□□ 9.1
KHDRBS1Q07666 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.77□□□□□ -1.815e-7■□□□□ 9.1
KHDRBS1Q07666 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.03□□□□□ -0.328e-7■□□□□ 9
KHDRBS1Q07666 AC005381.1-201ENST00000593065 769 ntTSL 3 BASIC10.13□□□□□ -0.798e-7■□□□□ 9
KHDRBS1Q07666 AC005394.1-201ENST00000589999 1269 ntTSL 1 (best) BASIC8.95□□□□□ -0.988e-7■□□□□ 9
KHDRBS1Q07666 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.713e-7■□□□□ 9
KHDRBS1Q07666 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.33■□□□□ 0.683e-7■□□□□ 9
KHDRBS1Q07666 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.5■□□□□ 0.393e-7■□□□□ 9
KHDRBS1Q07666 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.373e-7■□□□□ 9
KHDRBS1Q07666 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.283e-7■□□□□ 9
KHDRBS1Q07666 UCHL5-203ENST00000367450 1355 ntTSL 516.4■□□□□ 0.223e-7■□□□□ 9
KHDRBS1Q07666 UCHL5-212ENST00000449480 784 ntTSL 35.66□□□□□ -1.53e-7■□□□□ 9
KHDRBS1Q07666 UCHL5-207ENST00000416915 411 ntTSL 34.88□□□□□ -1.633e-7■□□□□ 9
KHDRBS1Q07666 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.21□□□□□ -1.743e-7■□□□□ 9
KHDRBS1Q07666 UCHL5-211ENST00000443327 785 ntTSL 54.09□□□□□ -1.753e-7■□□□□ 9
KHDRBS1Q07666 UCHL5-209ENST00000420791 1329 ntTSL 53.24□□□□□ -1.893e-7■□□□□ 9
KHDRBS1Q07666 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)16.51■□□□□ 0.235e-9■□□□□ 8.9
KHDRBS1Q07666 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.49□□□□□ -1.215e-9■□□□□ 8.9
KHDRBS1Q07666 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.34■□□□□ 0.532e-6■□□□□ 8.9
KHDRBS1Q07666 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.09■□□□□ 0.332e-6■□□□□ 8.9
KHDRBS1Q07666 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.56■□□□□ 0.242e-6■□□□□ 8.9
KHDRBS1Q07666 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.93□□□□□ -0.182e-6■□□□□ 8.9
KHDRBS1Q07666 RTN4-211ENST00000438462 656 ntTSL 58.99□□□□□ -0.972e-6■□□□□ 8.9
KHDRBS1Q07666 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.42□□□□□ -1.062e-6■□□□□ 8.9
KHDRBS1Q07666 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.62□□□□□ -1.352e-6■□□□□ 8.9
KHDRBS1Q07666 RTN4-214ENST00000486085 955 ntTSL 36.53□□□□□ -1.362e-6■□□□□ 8.9
KHDRBS1Q07666 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.392e-6■□□□□ 8.9
KHDRBS1Q07666 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.67□□□□□ -1.822e-6■□□□□ 8.9
KHDRBS1Q07666 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.34□□□□□ -1.882e-6■□□□□ 8.9
KHDRBS1Q07666 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.878e-7■□□□□ 8.9
KHDRBS1Q07666 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.158e-7■□□□□ 8.9
KHDRBS1Q07666 IGF2BP3-213ENST00000491719 800 ntTSL 517.47■□□□□ 0.395e-7■□□□□ 8.9
KHDRBS1Q07666 IGF2BP3-207ENST00000468263 706 ntTSL 215.23■□□□□ 0.035e-7■□□□□ 8.9
KHDRBS1Q07666 IGF2BP3-204ENST00000466809 588 ntTSL 514.32□□□□□ -0.125e-7■□□□□ 8.9
KHDRBS1Q07666 IGF2BP3-203ENST00000465058 534 ntTSL 414.22□□□□□ -0.135e-7■□□□□ 8.9
KHDRBS1Q07666 IGF2BP3-211ENST00000479504 559 ntTSL 414.22□□□□□ -0.135e-7■□□□□ 8.9
KHDRBS1Q07666 IGF2BP3-210ENST00000476938 500 ntTSL 213.42□□□□□ -0.265e-7■□□□□ 8.9
KHDRBS1Q07666 IGF2BP3-214ENST00000492771 564 ntTSL 412.03□□□□□ -0.485e-7■□□□□ 8.9
KHDRBS1Q07666 IGF2BP3-202ENST00000421467 2988 ntTSL 59.63□□□□□ -0.875e-7■□□□□ 8.9
KHDRBS1Q07666 IGF2BP3-208ENST00000469723 556 ntTSL 57.37□□□□□ -1.235e-7■□□□□ 8.9
KHDRBS1Q07666 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.385e-7■□□□□ 8.9
KHDRBS1Q07666 IGF2BP3-209ENST00000474105 663 ntTSL 44.79□□□□□ -1.645e-7■□□□□ 8.9
KHDRBS1Q07666 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.062e-6■□□□□ 8.9
KHDRBS1Q07666 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.1□□□□□ -1.751e-323■□□□□ 8.9
KHDRBS1Q07666 ABL1-202ENST00000372348 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.595e-7■□□□□ 8.8
KHDRBS1Q07666 ABL1-203ENST00000393293 532 ntTSL 55.2□□□□□ -1.585e-7■□□□□ 8.8
KHDRBS1Q07666 SMC6-210ENST00000621152 500 ntTSL 317.33■□□□□ 0.361e-6■□□□□ 8.8
KHDRBS1Q07666 SMC6-206ENST00000446852 2460 ntTSL 1 (best)15.99■□□□□ 0.151e-6■□□□□ 8.8
KHDRBS1Q07666 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.291e-6■□□□□ 8.8
KHDRBS1Q07666 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.871e-6■□□□□ 8.8
KHDRBS1Q07666 SMC6-204ENST00000428868 544 ntTSL 47.96□□□□□ -1.141e-6■□□□□ 8.8
KHDRBS1Q07666 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.761e-6■□□□□ 8.8
KHDRBS1Q07666 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.528e-7■□□□□ 8.7
KHDRBS1Q07666 ABHD5-207ENST00000486764 618 ntTSL 216.98■□□□□ 0.318e-7■□□□□ 8.7
KHDRBS1Q07666 ABHD5-203ENST00000454293 464 ntTSL 316.51■□□□□ 0.238e-7■□□□□ 8.7
KHDRBS1Q07666 ABHD5-201ENST00000013894 833 ntTSL 316.34■□□□□ 0.218e-7■□□□□ 8.7
KHDRBS1Q07666 ABHD5-204ENST00000456453 876 ntTSL 411.46□□□□□ -0.578e-7■□□□□ 8.7
KHDRBS1Q07666 DNAJC9-202ENST00000453189 762 ntTSL 35.69□□□□□ -1.51e-8■□□□□ 8.7
KHDRBS1Q07666 DNAJC9-203ENST00000469143 362 ntTSL 34.68□□□□□ -1.661e-8■□□□□ 8.7
KHDRBS1Q07666 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.73■□□□□ 0.114e-11■□□□□ 8.6
KHDRBS1Q07666 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.674e-11■□□□□ 8.6
KHDRBS1Q07666 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.684e-11■□□□□ 8.6
KHDRBS1Q07666 HNRNPU-208ENST00000475997 5290 ntTSL 56.42□□□□□ -1.383e-8■□□□□ 8.6
KHDRBS1Q07666 HNRNPU-203ENST00000366527 12852 ntTSL 23.89□□□□□ -1.793e-8■□□□□ 8.6
KHDRBS1Q07666 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.761e-6■□□□□ 8.6
KHDRBS1Q07666 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.71e-6■□□□□ 8.6
KHDRBS1Q07666 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.71e-6■□□□□ 8.6
KHDRBS1Q07666 CIZ1-211ENST00000467178 904 ntTSL 319.25■□□□□ 0.671e-6■□□□□ 8.6
KHDRBS1Q07666 CIZ1-221ENST00000488559 952 ntTSL 517.13■□□□□ 0.331e-6■□□□□ 8.6
KHDRBS1Q07666 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.271e-6■□□□□ 8.6
KHDRBS1Q07666 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.143e-8■□□□□ 8.6
KHDRBS1Q07666 JPX-213ENST00000640437 1620 ntTSL 515.25■□□□□ 0.032e-8■□□□□ 8.6
KHDRBS1Q07666 CIZ1-218ENST00000476727 1205 ntTSL 514.72□□□□□ -0.051e-6■□□□□ 8.6
KHDRBS1Q07666 XPO1-206ENST00000428210 6776 ntTSL 213.45□□□□□ -0.263e-8■□□□□ 8.6
KHDRBS1Q07666 XPO1-211ENST00000451765 643 ntTSL 312.96□□□□□ -0.333e-8■□□□□ 8.6
KHDRBS1Q07666 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.431e-6■□□□□ 8.6
KHDRBS1Q07666 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.581e-6■□□□□ 8.6
KHDRBS1Q07666 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.611e-6■□□□□ 8.6
KHDRBS1Q07666 CIZ1-223ENST00000491954 955 ntTSL 311.04□□□□□ -0.641e-6■□□□□ 8.6
KHDRBS1Q07666 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.721e-6■□□□□ 8.6
KHDRBS1Q07666 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.731e-6■□□□□ 8.6
KHDRBS1Q07666 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC10.21□□□□□ -0.782e-8■□□□□ 8.6
Retrieved 100 of 2,417 protein–RNA pairs in 141.2 ms