Protein–RNA interactions for Protein: Q07666

KHDRBS1, KH domain-containing, RNA-binding, signal transduction-associated protein 1, humanhuman

Known RBP eCLIP

Length 443 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS1Q07666 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.79■□□□□ 0.121e-323■■□□□ 11.9
KHDRBS1Q07666 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.93□□□□□ -0.181e-323■□□□□ 9.4
KHDRBS1Q07666 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.83□□□□□ -0.361e-323■■□□□ 11.9
KHDRBS1Q07666 MALAT1-202ENST00000534336 8708 ntBASIC9.81□□□□□ -0.841e-323■■□□□ 11.7
KHDRBS1Q07666 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.67□□□□□ -1.341e-323■■□□□ 11.9
KHDRBS1Q07666 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.67□□□□□ -1.341e-323■■□□□ 11.9
KHDRBS1Q07666 MT-TP-201ENST00000387461 68 ntBASIC5.8□□□□□ -1.481e-323■■■■□ 19.5
KHDRBS1Q07666 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.64□□□□□ -1.511e-323■□□□□ 9.4
KHDRBS1Q07666 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.49□□□□□ -1.531e-323■□□□□ 9.4
KHDRBS1Q07666 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.73□□□□□ -1.651e-323■□□□□ 9.8
KHDRBS1Q07666 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.1□□□□□ -1.751e-323■□□□□ 8.9
KHDRBS1Q07666 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.72□□□□□ -1.811e-323■□□□□ 9.4
KHDRBS1Q07666 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.27□□□□□ -2.211e-323■□□□□ 9.2
KHDRBS1Q07666 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.11□□□□□ -1.751e-48■■□□□ 11.7
KHDRBS1Q07666 MT-TL1-201ENST00000386347 75 ntBASIC2.76□□□□□ -1.977e-26■□□□□ 9.2
KHDRBS1Q07666 AC134978.1-201ENST00000579480 788 ntTSL 3 BASIC8.99□□□□□ -0.974e-24■■□□□ 11.8
KHDRBS1Q07666 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.351e-22■■□□□ 11.9
KHDRBS1Q07666 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.76□□□□□ -1.331e-22■■□□□ 11.9
KHDRBS1Q07666 TXN-203ENST00000487892 540 ntTSL 25.42□□□□□ -1.541e-22■■□□□ 11.9
KHDRBS1Q07666 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.52□□□□□ -1.853e-21■□□□□ 8.6
KHDRBS1Q07666 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC9.07□□□□□ -0.965e-21■□□□□ 8.2
KHDRBS1Q07666 GNAS-245ENST00000487862 1782 ntTSL 210.78□□□□□ -0.686e-21■□□□□ 10.9
KHDRBS1Q07666 GNAS-232ENST00000476196 1839 ntTSL 210.4□□□□□ -0.756e-21■□□□□ 10.9
KHDRBS1Q07666 GNAS-255ENST00000496934 2837 ntTSL 26.49□□□□□ -1.376e-21■□□□□ 10.9
KHDRBS1Q07666 ANKRD10-210ENST00000494859 705 ntTSL 525.18■■□□□ 1.622e-15■■■□□ 17.2
KHDRBS1Q07666 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.422e-15■■■□□ 17.2
KHDRBS1Q07666 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.23■□□□□ 0.192e-15■■■□□ 17.2
KHDRBS1Q07666 ANKRD10-206ENST00000465753 997 ntTSL 1 (best)15.37■□□□□ 0.052e-15■■■□□ 17.2
KHDRBS1Q07666 ANKRD10-209ENST00000489973 745 ntTSL 37.68□□□□□ -1.182e-15■■■□□ 17.2
KHDRBS1Q07666 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.36□□□□□ -1.552e-15■■■□□ 17.2
KHDRBS1Q07666 ANKRD10-207ENST00000475809 446 ntTSL 23.29□□□□□ -1.882e-15■■■□□ 17.2
KHDRBS1Q07666 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.165e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.175e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-205ENST00000465559 677 ntTSL 313.46□□□□□ -0.255e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-208ENST00000470171 746 ntTSL 213.22□□□□□ -0.295e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-213ENST00000489003 976 ntTSL 213.21□□□□□ -0.295e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.295e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-210ENST00000474345 713 ntTSL 313.21□□□□□ -0.295e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-216ENST00000491013 912 ntTSL 512.58□□□□□ -0.45e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.445e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-207ENST00000468479 938 ntTSL 212.13□□□□□ -0.475e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-219ENST00000495308 808 ntTSL 211.8□□□□□ -0.525e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-211ENST00000477057 741 ntTSL 210.98□□□□□ -0.655e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-204ENST00000461507 1022 ntTSL 210.98□□□□□ -0.655e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC10.81□□□□□ -0.685e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC10.03□□□□□ -0.85e-13■■■■□ 23.9
KHDRBS1Q07666 FDPS-209ENST00000471117 630 ntTSL 37.5□□□□□ -1.215e-13■■■■□ 23.9
KHDRBS1Q07666 FCGR2C-203ENST00000467903 1101 ntTSL 312.41□□□□□ -0.427e-13■■■■□ 19.4
KHDRBS1Q07666 FCGR2C-202ENST00000466542 1070 ntAPPRIS P5 TSL 1 (best) BASIC10.29□□□□□ -0.767e-13■■■■□ 19.4
KHDRBS1Q07666 FCGR2C-212ENST00000611236 958 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.887e-13■■■■□ 19.4
KHDRBS1Q07666 FCGR2C-211ENST00000543859 1507 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.987e-13■■■■□ 19.4
KHDRBS1Q07666 FCGR2C-209ENST00000507374 553 ntTSL 45.96□□□□□ -1.467e-13■■■■□ 19.4
KHDRBS1Q07666 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.96□□□□□ -1.467e-13■■■■□ 19.4
KHDRBS1Q07666 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.589e-13■■□□□ 11.9
KHDRBS1Q07666 ZFAND6-218ENST00000561012 585 ntTSL 318.43■□□□□ 0.549e-13■■□□□ 11.9
KHDRBS1Q07666 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.42■□□□□ 0.069e-13■■□□□ 11.9
KHDRBS1Q07666 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.049e-13■■□□□ 11.9
KHDRBS1Q07666 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.19e-13■■□□□ 11.9
KHDRBS1Q07666 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.189e-13■■□□□ 11.9
KHDRBS1Q07666 ZFAND6-221ENST00000564367 582 ntTSL 312.95□□□□□ -0.349e-13■■□□□ 11.9
KHDRBS1Q07666 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.559e-13■■□□□ 11.9
KHDRBS1Q07666 ZFAND6-216ENST00000560470 558 ntTSL 47.51□□□□□ -1.219e-13■■□□□ 11.9
KHDRBS1Q07666 RBMX-204ENST00000464781 1852 ntTSL 212.97□□□□□ -0.332e-12■■■■□ 23.9
KHDRBS1Q07666 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.492e-12■■■■□ 23.9
KHDRBS1Q07666 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC11.24□□□□□ -0.612e-12■■■■□ 23.9
KHDRBS1Q07666 RBMX-212ENST00000568578 4887 ntTSL 1 (best)9.5□□□□□ -0.892e-12■■■■□ 23.9
KHDRBS1Q07666 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC9.03□□□□□ -0.962e-12■■■■□ 23.9
KHDRBS1Q07666 RBMX-202ENST00000419968 940 ntTSL 57.81□□□□□ -1.162e-12■■■■□ 23.9
KHDRBS1Q07666 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.34□□□□□ -1.552e-12■■■■□ 23.9
KHDRBS1Q07666 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.843e-12■■■□□ 18.4
KHDRBS1Q07666 TMEM165-205ENST00000508404 1657 ntTSL 219.91■□□□□ 0.783e-12■■■□□ 18.4
KHDRBS1Q07666 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.93■□□□□ 0.623e-12■■■□□ 18.4
KHDRBS1Q07666 TMEM165-208ENST00000511710 731 ntTSL 36.43□□□□□ -1.383e-12■■■□□ 18.4
KHDRBS1Q07666 MTND2P28-201ENST00000457540 1044 ntBASIC3.81□□□□□ -1.85e-12■■□□□ 11.8
KHDRBS1Q07666 STK40-208ENST00000482458 900 ntTSL 320.68■□□□□ 0.94e-11■■■■■ 32.9
KHDRBS1Q07666 STK40-205ENST00000460017 511 ntTSL 515.91■□□□□ 0.144e-11■■■■■ 32.9
KHDRBS1Q07666 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.14e-11■■■■■ 32.9
KHDRBS1Q07666 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.24e-11■■■■■ 32.9
KHDRBS1Q07666 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.444e-11■■■■■ 32.9
KHDRBS1Q07666 MARCH3-203ENST00000504239 455 ntTSL 36.92□□□□□ -1.34e-11■■■□□ 18.2
KHDRBS1Q07666 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.73■□□□□ 0.114e-11■□□□□ 8.6
KHDRBS1Q07666 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.674e-11■□□□□ 8.6
KHDRBS1Q07666 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.684e-11■□□□□ 8.6
KHDRBS1Q07666 HP1BP3-210ENST00000438032 1159 ntTSL 516.88■□□□□ 0.295e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.255e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-208ENST00000424732 970 ntTSL 315.16■□□□□ 0.025e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-205ENST00000417710 572 ntTSL 57.02□□□□□ -1.295e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.295e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-212ENST00000487117 1598 ntTSL 26.21□□□□□ -1.425e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-207ENST00000419948 759 ntTSL 55.49□□□□□ -1.535e-11■□□□□ 9.5
KHDRBS1Q07666 HIST1H4H-203ENST00000634956 2163 ntTSL 56.92□□□□□ -1.36e-11■■■■■ 42.2
KHDRBS1Q07666 CEP152-210ENST00000561245 577 ntTSL 210.56□□□□□ -0.726e-11■■■□□ 17.9
KHDRBS1Q07666 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.866e-11■■■□□ 17.9
KHDRBS1Q07666 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.266e-11■■■□□ 17.9
KHDRBS1Q07666 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.796e-11■■■□□ 17.9
KHDRBS1Q07666 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.628e-11■■■□□ 19
KHDRBS1Q07666 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.28e-11■■■□□ 19
KHDRBS1Q07666 TAF15-203ENST00000603393 1214 ntTSL 1 (best)15.25■□□□□ 0.038e-11■■■□□ 19
KHDRBS1Q07666 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.128e-11■■■□□ 19
KHDRBS1Q07666 TAF15-212ENST00000604879 808 ntTSL 512.09□□□□□ -0.478e-11■■■□□ 19
Retrieved 100 of 2,417 protein–RNA pairs in 19.2 ms