RNA–Protein interactions for RNA: ENST00000523916.5

CASP3-206, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-206ENST00000523916 NISCHQ9Y2I1 1504 aa22.1■■□□□ 1.13
CASP3-206ENST00000523916 CCDC180Q9P1Z9 1646 aa19.77■□□□□ 0.76
CASP3-206ENST00000523916 ABCC9O60706 1549 aa19.3■□□□□ 0.68
CASP3-206ENST00000523916 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
CASP3-206ENST00000523916 MYT1Q01538 1121 aa18.66■□□□□ 0.58
CASP3-206ENST00000523916 RB1CC1Q8TDY2 1594 aa18.61■□□□□ 0.57
CASP3-206ENST00000523916 NACADO15069 1562 aa18.58■□□□□ 0.57
CASP3-206ENST00000523916 MYO15BQ96JP2 1530 aa18.48■□□□□ 0.55
CASP3-206ENST00000523916 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.54
CASP3-206ENST00000523916 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
CASP3-206ENST00000523916 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
CASP3-206ENST00000523916 UNC13AQ9UPW8 1703 aa18.22■□□□□ 0.51
CASP3-206ENST00000523916 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.48
CASP3-206ENST00000523916 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
CASP3-206ENST00000523916 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
CASP3-206ENST00000523916 SHROOM4Q9ULL8 1493 aa17.92■□□□□ 0.46
CASP3-206ENST00000523916 SCRIBQ14160 1630 aa17.92■□□□□ 0.46
CASP3-206ENST00000523916 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
CASP3-206ENST00000523916 PRKCSHP14314 528 aaPredicted RBP17.73■□□□□ 0.43
CASP3-206ENST00000523916 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
CASP3-206ENST00000523916 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
CASP3-206ENST00000523916 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.39
CASP3-206ENST00000523916 CECR2Q9BXF3 1484 aa17.39■□□□□ 0.37
CASP3-206ENST00000523916 APLP2Q06481 763 aa17.37■□□□□ 0.37
CASP3-206ENST00000523916 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
CASP3-206ENST00000523916 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
CASP3-206ENST00000523916 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.33
CASP3-206ENST00000523916 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
CASP3-206ENST00000523916 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
CASP3-206ENST00000523916 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
CASP3-206ENST00000523916 BCL11AQ9H165 835 aa17.08■□□□□ 0.32
CASP3-206ENST00000523916 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
CASP3-206ENST00000523916 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
CASP3-206ENST00000523916 HRCP23327 699 aa17.03■□□□□ 0.32
CASP3-206ENST00000523916 MROH2BQ7Z745 1585 aa17■□□□□ 0.31
CASP3-206ENST00000523916 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
CASP3-206ENST00000523916 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
CASP3-206ENST00000523916 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
CASP3-206ENST00000523916 WIZO95785 1651 aa16.82■□□□□ 0.28
CASP3-206ENST00000523916 RSF1Q96T23 1441 aaPredicted RBP16.76■□□□□ 0.27
CASP3-206ENST00000523916 DAXXQ9UER7 740 aaPredicted RBP16.74■□□□□ 0.27
CASP3-206ENST00000523916 LAMC3Q9Y6N6 1575 aa16.71■□□□□ 0.26
CASP3-206ENST00000523916 NESP48681 1621 aa16.68■□□□□ 0.26
CASP3-206ENST00000523916 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
CASP3-206ENST00000523916 ERCC6Q03468 1493 aa16.66■□□□□ 0.26
CASP3-206ENST00000523916 CUX2O14529 1486 aa16.6■□□□□ 0.25
CASP3-206ENST00000523916 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.25
CASP3-206ENST00000523916 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
CASP3-206ENST00000523916 KIF21AQ7Z4S6 1674 aa16.54■□□□□ 0.24
CASP3-206ENST00000523916 THOC2Q8NI27 1593 aaKnown RBP16.53■□□□□ 0.24
CASP3-206ENST00000523916 CFTRP13569 1480 aa16.49■□□□□ 0.23
CASP3-206ENST00000523916 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
CASP3-206ENST00000523916 CCDC88BA6NC98 1476 aa16.43■□□□□ 0.22
CASP3-206ENST00000523916 PPARGC1BQ86YN6 1023 aaKnown RBP16.43■□□□□ 0.22
CASP3-206ENST00000523916 MRC2Q9UBG0 1479 aa16.4■□□□□ 0.22
CASP3-206ENST00000523916 FANCD2Q9BXW9 1451 aa16.39■□□□□ 0.21
CASP3-206ENST00000523916 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
CASP3-206ENST00000523916 CENPBP07199 599 aaPredicted RBP16.38■□□□□ 0.21
CASP3-206ENST00000523916 WDR62O43379 1518 aa16.38■□□□□ 0.21
CASP3-206ENST00000523916 EIF5BO60841 1220 aaKnown RBP16.32■□□□□ 0.2
CASP3-206ENST00000523916 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
CASP3-206ENST00000523916 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
CASP3-206ENST00000523916 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
CASP3-206ENST00000523916 TOPBP1Q92547 1522 aa16.13■□□□□ 0.17
CASP3-206ENST00000523916 DNMBPQ6XZF7 1577 aa16.13■□□□□ 0.17
CASP3-206ENST00000523916 SUPT5HO00267 1087 aaKnown RBP16.12■□□□□ 0.17
CASP3-206ENST00000523916 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
CASP3-206ENST00000523916 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
CASP3-206ENST00000523916 ANP32EQ9BTT0 268 aa16.04■□□□□ 0.16
CASP3-206ENST00000523916 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
CASP3-206ENST00000523916 POLA1P09884 1462 aaPredicted RBP15.98■□□□□ 0.15
CASP3-206ENST00000523916 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
CASP3-206ENST00000523916 CUX1P39880 1505 aa15.96■□□□□ 0.15
CASP3-206ENST00000523916 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.15
CASP3-206ENST00000523916 EIF4G3O43432 1585 aaKnown RBP15.94■□□□□ 0.14
CASP3-206ENST00000523916 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
CASP3-206ENST00000523916 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
CASP3-206ENST00000523916 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
CASP3-206ENST00000523916 UBE2Q2Q8WVN8 375 aa15.91■□□□□ 0.14
CASP3-206ENST00000523916 SOGA1O94964 1423 aa15.89■□□□□ 0.13
CASP3-206ENST00000523916 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
CASP3-206ENST00000523916 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
CASP3-206ENST00000523916 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
CASP3-206ENST00000523916 BIVM-ERCC5R4GMW8 1640 aa15.85■□□□□ 0.13
CASP3-206ENST00000523916 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.13
CASP3-206ENST00000523916 TOP2BQ02880 1626 aa15.83■□□□□ 0.12
CASP3-206ENST00000523916 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
CASP3-206ENST00000523916 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
CASP3-206ENST00000523916 ABCA10Q8WWZ4 1543 aa15.79■□□□□ 0.12
CASP3-206ENST00000523916 SYNJ1O43426 1573 aa15.78■□□□□ 0.12
CASP3-206ENST00000523916 TDRD9Q8NDG6 1382 aaKnown RBP15.77■□□□□ 0.12
CASP3-206ENST00000523916 CHD1O14646 1710 aa15.77■□□□□ 0.11
CASP3-206ENST00000523916 ANO8Q9HCE9 1232 aaPredicted RBP15.76■□□□□ 0.11
CASP3-206ENST00000523916 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
CASP3-206ENST00000523916 ABCA5Q8WWZ7 1642 aa15.75■□□□□ 0.11
CASP3-206ENST00000523916 GRIN2BQ13224 1484 aa15.75■□□□□ 0.11
CASP3-206ENST00000523916 PBRM1Q86U86 1689 aa15.74■□□□□ 0.11
CASP3-206ENST00000523916 MAGI1Q96QZ7 1491 aaPredicted RBP15.74■□□□□ 0.11
CASP3-206ENST00000523916 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
CASP3-206ENST00000523916 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms